Thiomicrospira aerophila: THIAE_06005
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Entry
THIAE_06005 CDS
T03589
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tao
Thiomicrospira aerophila
Brite
KEGG Orthology (KO) [BR:
tao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tao03032
]
THIAE_06005
03400 DNA repair and recombination proteins [BR:
tao03400
]
THIAE_06005
Enzymes [BR:
tao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
THIAE_06005
DNA replication proteins [BR:
tao03032
]
Prokaryotic type
DNA Topoisomerases
THIAE_06005
DNA repair and recombination proteins [BR:
tao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
THIAE_06005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AHF01389
UniProt:
W0DWL7
LinkDB
All DBs
Position
1212566..1214671
Genome browser
AA seq
701 aa
AA seq
DB search
MNLFIVESPGKIKSIQKYLGHGWQVMASVGHIRDLPVKEMGIEFNTWRLKYQLTDKGKGV
YSKLKAAAANADRIYLATDLDREGEAIAWHLAVMLKIPESKIYRVKYPEITETAIKKALS
NPGKINMNLVHAQEARRAIDRLVGYTVSPAVSRANNLKLSAGRVQSIIVRLIADRYQAFV
DFKPRDYYGALIKLNGFEADWNTKPHLAAGDDYNFNRSLAVEAAGVTSVRVVATEHKDTT
QKPPAPFITSSMQQAAVKKLNMNTEQAMKFAQELYEAALITYHRTDSVELSDDAIRMIRG
YAQSQGLPLPATPNSFKGKSKNAQEAHEAIRPTDINVTSASSVSEGAAMLYALIHKQALV
CQLAPAKLKKTTVKLVSDDGRFEYLAKGSILVSPGFMVISGSAEDAVLPSIDEGEIYDVI
EGVVQDKKTKAPSLFDEASLLGELERLGIGRPATWAPTIKNIKQREYIKVDKKKLVPTET
GMVLRRSLDGFGFMEYGFTAEIEDQMDAVSSGHDSYQNCVTQVFQSVVKDLSSHFGYAGE
GEDFFLPPKERDYQASEKQVAVAKKMADVLGLELDIDLTSGKAVSAFLEANATAYKSSFK
PSDKQLEYAQGLALTLGVTIGPDMLSSALKLSEWIDKNRQLAFAKRPPTEKQLAFAQKLA
DENGVSLPSDVSTSSGTCSDFINQYMGDKPKKIKRVVKKAK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtttattgttgaatcccccggtaaaattaaatcgatccaaaaataccttggt
catggttggcaagtgatggcctcggtcggtcacattagagatcttccggttaaagaaatg
gggattgaatttaatacctggcgattaaagtatcagttaaccgataaaggtaaaggcgtt
tacagtaagcttaaagccgccgcagctaatgcagataggatttatcttgctaccgactta
gatcgtgaaggtgaggctatagcatggcatctagcggtcatgcttaaaatccctgaatcg
aaaatttatcgggttaaataccctgagattactgaaaccgcgattaaaaaagccttatcg
aatccaggcaagataaatatgaatcttgtacatgcacaagaagcacgtcgggccattgat
cgactggtcggttatacggtatcaccggcagtatcacgcgctaataatcttaagctttca
gccggtcgtgtgcagtcgattattgttagattgattgcagatcgctaccaggcttttgtc
gattttaaaccgcgtgattattatggtgctctcattaagctcaatgggtttgaagctgat
tggaataccaagccacatttagccgctggcgatgattacaattttaatcgctcgcttgca
gttgaggccgctggtgttaccagtgttcgcgttgtggccactgaacacaaagacacaaca
caaaagccccccgctccgtttatcacatccagtatgcaacaagccgctgttaaaaaactc
aatatgaatactgagcaggcgatgaaatttgctcaagaactgtatgaggccgcgctgatt
acttatcaccgtactgatagtgttgagttgtctgatgatgctattcgtatgatccgcggg
tatgcacaatctcaaggtcttcctttaccggccacgcctaactcattcaaaggcaagtct
aaaaacgcacaggaagcccatgaagcgattagacccactgatattaacgtgactagcgca
tcaagtgtgagtgaaggagcagcgatgctttatgcgcttatacataagcaagccttggta
tgtcagttggctccggccaagttgaaaaaaaccacggtgaaactggtatctgatgatggt
cggtttgaatatttagccaaaggatccattttagtgagtccgggctttatggttattagt
ggatccgctgaggatgcagtcttaccgtctattgatgaaggtgaaatttatgatgtgatt
gaaggtgttgttcaggataaaaaaaccaaggcaccgagtctatttgatgaagccagtttg
ttaggtgaattggaacgtcttgggattggcaggcctgctacttgggcaccgacaattaaa
aatattaaacagcgtgaatacattaaagtcgataagaaaaaactggtaccgacggaaacc
ggtatggtgcttcgtcgatcacttgatgggttcgggtttatggaatatggttttaccgct
gaaatcgaagatcagatggatgctgtatccagtggccacgattcatatcaaaattgtgta
acccaagtgtttcaatccgtggttaaggatttatcgtctcattttgggtatgccggtgag
ggtgaggattttttcttgccacctaaagaacgtgactatcaggctagtgaaaagcaagtg
gccgtcgctaagaaaatggccgatgttttgggtctggagttggatattgatttaacatcc
ggtaaggctgtttctgcttttttagaagctaatgctactgcctataagtcatcattcaag
ccatctgataaacagcttgagtacgctcaaggtttggctttgactttaggtgtgactatt
ggccctgatatgttatcaagtgcgcttaaattatccgaatggatagataaaaatcgtcaa
cttgcttttgctaagcgtccaccaaccgagaagcaattggcattcgctcagaaattggct
gatgaaaacggtgtgtcattgccaagtgatgtatctactagcagtggtacttgcagtgat
ttcatcaaccaatatatgggtgataaacctaaaaaaataaagcgagttgtgaaaaaggct
aaatag
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