Thiomicrospira aerophila: THIAE_06920
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Entry
THIAE_06920 CDS
T03589
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tao
Thiomicrospira aerophila
Pathway
tao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THIAE_06920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tao03400
]
THIAE_06920
Enzymes [BR:
tao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
THIAE_06920
DNA repair and recombination proteins [BR:
tao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THIAE_06920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
UvrD-helicase
SLFN-g3_helicase
Helicase_RecD
AAA_22
SH3_13
UvrD_C
ResIII
RecD_N
PhoH
nSTAND3
T2SSE
DEAD
AAA_12
Herpes_Helicase
NTPase_1
AAA_5
AAA_29
NPHP3_N
AAA_28
PIF1
AAA_16
AAA_7
FtsK_SpoIIIE
Rad17
SRP54
AAA
CbiA
ATPase
AAA_24
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AHF01523
UniProt:
W0DW62
LinkDB
All DBs
Position
1391440..1393038
Genome browser
AA seq
532 aa
AA seq
DB search
MTLQQPTSFLDHRLAAFFAPNNPELAQIIKQLSRALSEGHSCIQLDADQQTIIRNNPSEA
WVLDDDLLYFSRYHQYETQLAQQLKRKAAPTEPLGLDAQSLHALFNDPLQQQAAELALTK
QLALITGGPGTGKTTTVVKILALLMQQHPHATFALAAPTGKAAMRLQESIANSKAQLTDL
FPADLLDKIPHQVSTLHRLLGARPLTPEFKHHAENPLSHDVLVVDEASMIDLALMSKLVN
ALKPNAKLILLGDKDQLTSVESGAVLSDCYRALADNRVELQTTYRFNEQIKKLAHAVNQQ
DAEKVLILCKEAEKADSQAVIGLKNVQKASELSGFIQRHYRAYFDQVTQVQTEQDILALF
QTFNQFKILSATREGEFGLSAFNQLAQPGLVTTQWYAGRPVMIDKNDPSTGLYNGDIGLC
LPNIHAPNSDQLKVYFLLADQLRAFVPSRLPSHQTAFAMTIHKSQGSEFAHVMIALGNQL
NSQTESLVTKELLYTAITRAKSQVTLVASDSVVKQCVSNAIERHSGLARRLT
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgactcttcaacaacccacctcgtttttagatcatcggttagcggcgttttttgcgccg
aacaaccccgagctggcgcaaatcattaaacagctgtcgcgcgcgctcagtgaaggtcac
agttgcattcaactcgatgctgaccaacaaaccatcattcgcaacaatccgagcgaagct
tgggtgctggatgacgatttgctctatttcagccgctaccatcaatacgaaacccaactg
gcacaacaactaaaacgcaaagccgcccccaccgagccgcttggcttagacgcgcaaagt
ctccacgcgctgtttaacgacccgttgcagcaacaagccgctgaattggcactgaccaaa
caactcgcgctgattaccggcggccctggcaccggcaaaaccactaccgtggtcaaaatt
ctcgccctactcatgcaacagcacccgcacgccacttttgcgctggccgcgccgaccggc
aaagcggcgatgcgactgcaagaatcgattgccaatagcaaagcgcaactgaccgatttg
tttccagccgacctgctagacaagattccgcaccaagttagtaccctgcatcgtctgctg
ggcgcacgaccgctgacgccagaatttaaacatcatgccgaaaacccactcagtcacgat
gtgctggtggtcgatgaagcctcgatgattgatttggcgctgatgagtaaattggtcaat
gcccttaaaccgaatgccaaactcattctgctcggcgataaagatcaactcacctcggtc
gaatccggtgcggtgctgtccgactgttaccgcgccttagccgataatcgggtcgaactg
caaaccacctaccgctttaacgaacagatcaaaaaactggcacacgcggtcaatcaacag
gacgcagaaaaagtattgatactgtgcaaagaagccgaaaaagccgacagccaagcggtc
attgggttaaaaaacgtgcaaaaagccagcgagctgagcggctttattcaacgccattac
cgcgcctattttgatcaggtcacccaagttcaaaccgaacaagacattctcgcgctgttt
caaacctttaaccaatttaaaattctcagcgcgacgcgtgaaggcgaatttggtttaagt
gcgtttaatcagcttgcgcaaccaggcctggtgaccacgcaatggtacgccggacgtccg
gtaatgattgacaaaaacgacccgagcaccggcttatacaacggcgacatcggcttgtgt
ttgccgaatattcacgcgccgaacagcgaccaattgaaagtgtattttctgctcgccgac
cagctgcgagcatttgtgccgagtcgcttacccagccatcaaaccgcgtttgcgatgacg
attcacaaaagccaaggctcggaatttgcccacgtaatgattgcactgggcaaccagctc
aacagccaaaccgaatccttagtaaccaaagaactgctctacaccgccatcacccgcgcc
aaaagccaagtgacactggtcgccagtgacagcgtcgtgaagcaatgcgtcagcaacgcg
atagagcgccacagtggtttagcgcggcgtttgacgtga
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