Thiomicrospira aerophila: THIAE_10030
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Entry
THIAE_10030 CDS
T03589
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tao
Thiomicrospira aerophila
Pathway
tao03420
Nucleotide excision repair
tao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THIAE_10030 (uvrD)
03430 Mismatch repair
THIAE_10030 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tao03400
]
THIAE_10030 (uvrD)
Enzymes [BR:
tao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THIAE_10030 (uvrD)
DNA repair and recombination proteins [BR:
tao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THIAE_10030 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
THIAE_10030 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHF02050
UniProt:
W0DTX6
LinkDB
All DBs
Position
complement(2015809..2017992)
Genome browser
AA seq
727 aa
AA seq
DB search
MDVSYILDGLNDAQRQAVTLASGHGLVLAGAGSGKTRVLVHRIAWLVEVIGASPYNVLAV
TFTNKAAREMRGRMEALMGPSAKSVTMGTFHGIAYQLLRQHYQAAGLPQAFQILDSDDQK
RLVKRLLKAMNLDETQWPVKQVMAFINGEKEEGRRSKHVDVGHNPYLKTLVAVYQAYEQQ
CQQAGLVDFAELLLRAHELWLRAPEVLAFYQQRYQHILVDEFQDTNSLQYAWLRVLAGGR
GRLFVVGDDDQSIYGWRGAKVENIRLFEQQFADVTLVRLEQNYRSTNRILQAANQLIAHN
TERLGKNLWSDGEPGEPILIYEAFNDLDECQYVIEQIQAWLREGGAREEVAILYRSNAQS
RVFEQGLLQAEMPYRIYGGLRFYDRAEIKDVLAYLRLVMNSADDAAFERVYNLPTRGLGD
KTMQQVRDIARDQACSMWAASEWLLDHGGLTARAKGALQGFLNLITELASLQPSLALADF
VLQVMQDSGLQAHFEKDRSEQGQSRLENLDELVNAAASFEKRQDLQADGESDHSLLNFLA
QATLEAGDNQASAGESAIQLMTLHAAKGLEFPLVFMVGMEEGLFPSQSSQDDPARLEEER
RLAYVGITRAERRLFMCAAQRRRLHGNEIYSQPSRFLRELPDDAVQWVRMKSAVQSTRSW
AADASTAAKIQQNDTGLRLGQAVFHQKFGPGVVMATEGSGDHARIQVSFKQAGVKWLVMA
YANLTPV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcagttacattttagatggcttgaatgatgcacaacgtcaagcggttacccta
gcgtcgggtcatggattagttttagccggcgcaggttcgggtaaaacgcgggtattggtg
catcggattgcttggttggtcgaggtgataggggcgagtccatataatgtgttggcggtc
acttttacaaataaagcggcgcgtgagatgcgcggacggatggaagcgttgatggggccc
tctgctaaaagtgtcacgatggggacttttcacggcatcgcttatcaattattgcgtcaa
cattaccaagcagcaggcctgccgcaagcctttcaaattttagacagtgatgatcaaaag
cgcttggtcaaacggcttttaaaagcaatgaatcttgatgaaacgcaatggccggttaag
caggtgatggcctttattaatggtgaaaaagaagaaggtcgtcgatccaagcacgttgat
gttgggcacaatccttatttaaaaaccttggttgccgtttatcaagcctatgagcaacag
tgtcagcaagccggcctggttgattttgccgagctgttacttcgcgcgcatgagttgtgg
ttacgtgccccggaggtgctcgcgttttatcagcagcgttatcaacatattctggtggat
gaatttcaagacactaatagtctgcaatatgcctggttgcgtgtgttagctggcgggcga
ggacgattatttgtggttggtgacgatgatcaatccatttatggttggcggggtgccaag
gtcgaaaatattcggttgtttgaacagcaatttgccgatgtgactttggttagattggag
cagaattatcgttcaaccaatcgtatcttgcaggcggccaaccagcttattgcccataat
accgaacggctgggtaaaaacctatggagtgatggggagcccggtgagccgattttgatt
tatgaagcctttaatgatttggatgaatgtcaatatgtcattgagcaaatccaggcctgg
ttgcgagagggtggtgcgcgtgaggaggtcgccattttatatcgctctaatgcccagtcg
cgcgtgtttgagcagggcttgttacaggccgagatgccctatcgcatttatggcgggttg
cgtttttatgatcgcgctgagattaaagatgtgctggcgtatttgcgattggtgatgaat
tcggctgacgatgccgcatttgagcgtgtctataatttaccgactcgtggattaggggat
aagaccatgcagcaggtgcgtgatattgcgcgtgaccaggcctgctcaatgtgggcggcc
agcgagtggttattggatcatggcggcttaacggcacgcgccaaaggggcgttgcagggt
tttctaaatttaattaccgagttggcgagtttgcaaccgagtttggcgttggcggatttt
gtcttgcaggtgatgcaggattccggtttgcaggcgcatttcgaaaaggatcgttctgag
caaggtcagtcacgattagaaaacttggatgaattagtcaacgcggcggcgagttttgaa
aaacgccaagacctacaagctgatggcgaatctgatcatagtttgcttaatttcttagct
caggcgacgctagaagcgggtgataatcaagccagtgcgggtgaatcggcgattcaattg
atgacgctgcacgcggccaaaggattggagtttccgttggtctttatggtgggtatggaa
gagggtttgtttccttcccagtcttctcaagatgatccggcgcgacttgaagaagaacgt
cgcctagcttatgtggggattacgcgcgcggaacgtcggctatttatgtgtgcggcccag
cgtcggcgtttgcatggtaatgagatttatagccaaccttcgcgctttttaagggagtta
cctgatgatgccgtgcaatgggtgcgaatgaaatcagcggtgcaatccacgcgcagttgg
gcagcggatgcctcgacggcggctaagatacaacagaatgatacgggcttgcgtttaggc
caagcggtatttcatcaaaagtttgggccgggtgtggtgatggcgactgaaggcagtggt
gatcacgcacgtattcaggtttcctttaaacaggcgggggtcaagtggttggtgatggcc
tatgctaatttaacccctgtttaa
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