Thiomicrospira aerophila: THIAE_10085
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Entry
THIAE_10085 CDS
T03589
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tao
Thiomicrospira aerophila
Pathway
tao03030
DNA replication
tao03410
Base excision repair
tao03420
Nucleotide excision repair
tao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THIAE_10085
03410 Base excision repair
THIAE_10085
03420 Nucleotide excision repair
THIAE_10085
03440 Homologous recombination
THIAE_10085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tao03032
]
THIAE_10085
03400 DNA repair and recombination proteins [BR:
tao03400
]
THIAE_10085
Enzymes [BR:
tao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THIAE_10085
DNA replication proteins [BR:
tao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
THIAE_10085
DNA repair and recombination proteins [BR:
tao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
THIAE_10085
NER (nucleotide excision repair)
GGR (global genome repair) factors
THIAE_10085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF1151
Motif
Other DBs
NCBI-ProteinID:
AHF02060
UniProt:
W0DTZ0
LinkDB
All DBs
Position
2026645..2029446
Genome browser
AA seq
933 aa
AA seq
DB search
MSHTDSAPIILVDGSSYLFRAFHALPPLTNKDGHPTGAIYGVTNMIGKLLETYQPEFMAV
VFDAKGKTFRNDLYPEYKAHRPPMPDDLRVQIEPIHQIVKALGLPLLVIEGVEADDVIGT
LAVQATQAQRDALISTGDKDMAQLVNEHITLINTMNNTLMTQDKVVEKFGIRPDQIIDYL
ALMGDSSDNIPGIPKCGPKTAVKWLTAYDTMDNLIAHANDIKGKIGETLREHIPHLPLSR
TLTTIRTDCELPINLPDLKRDEADIETLKTLFAEYEFKNWLKQLEDGQLPFSKQVNHHAK
PAPKNAANIDNTPSPGLVTSTRPTQTFESADYQTILDATSLDNWLNKLQQAELFALDTET
TALEPMQAQLVGLSFALEQNGKIEAAYLPLKHDYDGAPTQLDFEATLAKLKPLLESDTPQ
KIGQNLKYDWHILANHCIQLRGIAFDTMLESYVLNSVATRHNMDDLAQHYLHKTTIKFED
IAGKGKAQKTFNQIELDQAAPYAAEDADITLQLHQTLYPQLTDQPGLVPVLNDIEMPLLP
VLAKMERHGMLIDKDLLKIQSGELAEKINLLEEEAYRLAGQEFNLGSPKQLQDILFEQLG
LPVIKKTPKGVPSTAEPVLAELAEQGHELPKVITQHRSLAKLKSTYTDALPKQIHPDTGR
VHTSYQQAVASTGRLSSTEPNLQNIPIRTAEGRRIRQAFIARPGYQLLAADYSQIELRIM
AHLSEDPGLVQAFAEGRDIHQATAAEIFDMPLDEVTPEQRRSAKAVNFGLIYGMSAFGLA
NQLGIDRGLAQAYIDRYFDRYPGVKTYMNTTKADAEYYGYVETLAGRRFYLPDIKARGPR
KQHAERTAINAPMQGTAADIIKKAMIRLDQWIEHSELDIRMLMQVHDELVFEVKTEQLEQ
AKPEIKRIMESAMPLSVPLIVEIGDGDNWDQAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacaccgattctgctccgattattcttgttgatggttcgtcttatttattccgc
gcgtttcatgcgctgccgcctttgaccaataaagatggtcacccgaccggcgcgatttat
ggtgtcaccaatatgattggcaagctgttggaaacctatcaaccggaatttatggcggtg
gtgtttgatgccaagggcaaaaccttccgcaacgatctttatcccgaatacaaagcccat
cgcccacccatgccggatgatttacgagtccaaatcgagccgattcatcagattgtcaaa
gccctgggcttaccgttgctggtgattgaaggcgtggaagctgatgacgtgatcggcacg
ctggcggtgcaagccacccaagcccagcgcgatgcgttgatttcaaccggcgacaaagac
atggcacaattggtgaatgaacatatcaccctgattaacaccatgaacaataccctgatg
acacaggataaggtggtggaaaagtttggcattcgccctgatcaaattattgattacttg
gcgctaatgggcgatagctcggacaatattcccggcattcccaagtgcggaccgaaaacc
gccgtgaaatggctcaccgcttatgacacgatggataacttgattgcccatgccaatgac
atcaaaggcaaaataggcgaaaccctgcgtgagcatattccgcatttgcccttgtcgcgc
accttaaccaccattcgcaccgattgtgagttgccgattaatctgccggatttaaaacgc
gatgaagccgatattgaaacgcttaaaaccctgtttgccgaatatgaatttaaaaactgg
ctgaaacagttggaagacggtcaattgccgtttagcaaacaggtcaatcaccatgctaaa
cctgcgccgaaaaacgcggcaaacattgacaatacaccatcaccaggcctggtaacaagc
actaggccaacccaaacctttgaatcagccgactatcaaacgattcttgacgcgactagc
ctcgacaactggcttaataaactccaacaagccgaactgtttgcgttggatacggaaacc
actgcgcttgagcccatgcaagcgcaattggtcggactgagttttgcgctagaacaaaac
ggcaaaatcgaagccgcctatttgccgctgaaacatgattatgacggtgctccgactcaa
cttgattttgaggctaccctcgccaaacttaaaccgctgctggaatctgacacgccgcaa
aaaatcggccaaaatctcaaatacgactggcatatcctcgctaatcactgcattcaattg
cgcggtatcgcgtttgataccatgcttgaatcctatgtgcttaattcggtggcgacgcgc
cataatatggacgatttagcgcaacactatttgcacaaaactacaattaaatttgaagac
attgccggcaagggcaaggcgcaaaaaacctttaaccaaattgaactcgaccaagccgcg
ccctatgcggcggaagatgccgatattactctgcaattgcatcaaaccctttatccgcaa
ctgaccgatcaaccgggcctggtaccggttttaaacgacatagaaatgccactcttgccg
gtattggcaaaaatggaacgccacggcatgctcatcgacaaagacctactgaaaattcaa
agcggcgaactggcggaaaaaattaatctgttagaagaagaagcctaccgccttgccgga
caagaatttaacctcggttcacccaagcaactgcaagacattctattcgagcagttgggg
ctaccggtcatcaaaaaaacgccaaaaggcgtgccctccaccgccgaacctgtattggcg
gagctggcagaacaaggccatgaactgcccaaagtgattactcaacaccgcagcctagcc
aaactcaaatccacctacaccgatgcgctacccaagcaaattcatcccgacactgggcgc
gtgcatacctcttaccaacaagccgtcgcctcgaccggacgcttgtcgtccaccgaaccg
aatttgcagaacattccgattcgcaccgccgaagggcgtcgcattcgccaagcgtttatc
gccaggcctggttatcaactgctggccgccgactattcacaaatcgaattgcgcattatg
gcgcatctgagtgaagacccaggcctggtgcaagcctttgccgaagggcgcgatattcac
caagcgaccgccgctgaaatttttgacatgccgttagatgaagtcacgcccgaacaacgc
cgcagcgccaaagcagtgaatttcgggctaatttacggtatgtcagcctttggactcgcc
aatcaacttggcatagaccgtgggctggcgcaggcctatatcgaccgttattttgatcgt
tatccaggcgtgaaaacctatatgaacaccaccaaggccgatgccgaatattatggctat
gtcgaaaccctggccggacggcgtttttatctgccggacattaaagcacgcggaccgcgc
aaacaacatgccgaacgcaccgcgatcaacgcgccgatgcaaggcacggcagcggatatt
attaaaaaggcaatgattcgcttagatcaatggattgagcacagtgagttagatattcgg
atgctaatgcaggtgcacgatgaattggtgtttgaagtcaaaaccgaacaacttgaacag
gccaaaccggagatcaagcgcattatggaaagcgcgatgccactcagcgtgccgttaatt
gtagaaatcggcgatggcgataactgggaccaagcgcattaa
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