Thermus aquaticus: TO73_0404
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Entry
TO73_0404 CDS
T04117
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
taq
Thermus aquaticus
Pathway
taq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
taq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TO73_0404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taq03021
]
TO73_0404
03400 DNA repair and recombination proteins [BR:
taq03400
]
TO73_0404
Enzymes [BR:
taq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TO73_0404
Transcription machinery [BR:
taq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TO73_0404
DNA repair and recombination proteins [BR:
taq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TO73_0404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
RAD51D_N
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ALJ90264
UniProt:
A0ABN4IHT7
LinkDB
All DBs
Position
332893..333837
Genome browser
AA seq
314 aa
AA seq
DB search
MLESKLKAPVFTARTQGRHYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIED
VLHEFSTIPGVKEDVVEIILNLKELVVRFLDPKMASTTLILRAEGPKEVRAGDFTPSADV
EIMNPDLHIATLEEGGKLYMEVRVDRGVGYVPAERHGIKDRINAIPVDAIFSPVRRVAFQ
VEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHLNYFANPEASLLPTPEVSK
GEKRESAEEDLDLPLEELGLSTRVLHSLKEEGIESVRALLALNLKDLRNIPGIGERSLEE
IRQALAKKGFTLKE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgttggagagcaagctgaaagccccggtcttcacggcgcgcacccaggggcgccactac
ggcgagttcgtcctggagcccctagaaagggggtttggggtcaccctggggaaccctctc
cgccgcatcctcctctcctccatccccgggaccgcggtcaccagcgtctacattgaggac
gtcctccacgagttctccaccattcccggggtgaaggaggacgtggtggagatcatcctg
aacctgaaggagctggtggtgcgcttcctggaccccaagatggcgtccaccaccctgatc
ctcagggcagaaggccccaaggaggtgagggcgggcgacttcaccccctccgccgacgtg
gagatcatgaaccccgacctccacatcgccaccctcgaggagggcgggaagctctacatg
gaggtgcgggtggaccggggggtggggtacgtgcccgccgagcgccacggcatcaaggac
cgcatcaacgccatccctgtggatgccatcttctccccggtgcgccgggtggccttccag
gtggaggacacccgcctgggccagcgcacggacctggacaagctcaccttgaggatctgg
accgacggctccgtcacccccctcgaggccctgaaccaggccgtggccatcctgaaggag
cacctgaactacttcgccaaccccgaggcctcccttctgcccacccccgaggtgtcgaag
ggggagaagcgggagagcgccgaggaggacctggacctgcccttggaggagcttgggctt
tccacccgggtcctccacagcctcaaggaggaggggattgagtccgtgcgcgcccttctg
gccctcaacctcaaggacctgaggaacatccccggcatcggggagcggagcctggaggag
atccgccaggccctggccaagaagggcttcaccctaaaggagtga
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