Thermus aquaticus: TO73_0733
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Entry
TO73_0733 CDS
T04117
Name
(GenBank) ribonuclease J2 (endoribonuclease in RNA processing)
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
taq
Thermus aquaticus
Pathway
taq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TO73_0733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taq03019
]
TO73_0733
Messenger RNA biogenesis [BR:
taq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TO73_0733
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ALJ90587
UniProt:
A0ABM5VK94
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All DBs
Position
complement(640303..642030)
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AA seq
575 aa
AA seq
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METPERKPRRRRRRRPQEGASLPQGASDPVEIIPLGGMGEIGKNITVFRYRDEMFVLDGG
LAFPEEGMPGVDLLIPRVDFLIENRHRIKAWVLTHGHEDHIGGLPFILPMVFGKESQVPI
YGARLTLGLLKGKLEEFGLRPGSFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGLVI
RTPIGTIVHTGDFKLDATPIDGKVSHLAKVAQAGAEGVLLLIADSTNAERPGYTPSEMEI
AKELDRVIGRAPGRVFVTTFASHIHRIQSVIWAAEKYGRKVAMEGRSMVKFSRIAMELGY
LKVKDRLYALEEVMDLPDHQVLILATGSQGQPMSVLHRLAFEGHSRMAIKPGDTVILSSS
PIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHGE
VRHQTNFKWLAESMSRPPEKTLIGENGAIYRLTPHTFEKVGTVPHGVLYVDGLGVGDITE
EILADRRHMAEEGLVVITALAGEDPVVEVVSRGFVKAGEKLLGEVRRMALEALLAGIREK
KPLERIRDDIYYPVKKFLKKATGRDPMILPVVIEG
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccagagaggaaaccgaggcgtagaaggcgcaggcgcccccaggagggggct
tctctgccccaaggggcttcagacccggtggagatcatccccttaggggggatgggggag
atcggcaagaacatcaccgtcttccgctaccgggacgagatgttcgtcctggacggaggc
ctggccttccccgaggaggggatgccgggggtggacctcctcatcccccgggtggacttc
ctcatagaaaaccgccaccgcatcaaggcctgggtgctcacccacggccacgaagaccac
atcggggggcttcccttcatcctgcccatggtattcggcaaggagagccaggtgcccatc
tacggcgccaggctcaccctggggcttttaaagggcaagctggaggagttcggcctgagg
cccgggagcttcaacctgaaggagatctcccccgacgaccgcatccaggtggggcggtac
ttcaccctggacctcttccgcatgacccattccatccccgacaactcggggctggtgatc
cgcacccccatcggcaccatcgtccacaccggggacttcaagctggacgccacccccatt
gacggcaaggtctcccacctggccaaggtggcccaggcgggggccgagggggtcttgctc
ctcatcgccgactccaccaacgccgaaaggcccggctacacccccagcgagatggagatc
gccaaggagctggaccgggtgatcggccgcgccccgggaagggtcttcgtgaccaccttc
gccagccacatccaccgcatccagtcggtgatctgggccgcggagaagtacgggcggaag
gtggccatggaggggcggagcatggtcaagttcagccgcatcgccatggagctgggctac
ctgaaggtgaaggaccgcctctacgccctcgaggaggtcatggacctccccgaccaccag
gtcctgatcctggccacgggaagccagggccagcccatgtcggtcctccaccggctggcc
tttgaggggcactcccggatggccatcaagcccggcgacacggtgatcctctcctccagc
cccatccccggcaacgaggaggcggtgaaccgggtcatcaatcgcctctacgctctgggg
gcctacgtcctctacccccccacctacaaggtccacgcctcgggccacgcctcccaggag
gagctcaagctgatcctgaacctcaccacgcccaggttcttcctgccctggcacggggag
gtgcgccaccagaccaacttcaagtggctggcggagagcatgagccgccccccggagaag
accctgatcggggaaaacggggccatctaccgcctcacgccccacacctttgagaaggtg
ggcaccgtgccccacggggtcctttacgtggacggcctgggggtgggggacatcaccgag
gagatcctggccgaccgccgccacatggccgaggagggcctggtggtcatcaccgccctg
gcgggggaagacccggtggtggaggtggtctcccggggcttcgtgaaggccggggagaag
cttcttggcgaggtgcggcggatggccctcgaggccctcctggccggcatccgggaaaag
aagcccctagagcgcatccgggacgacatctactacccggtgaaaaagttcctgaagaag
gccacaggccgggaccccatgatcctgccggtggtcatagaggggtga
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