Thermospira aquatica: KDW03_02500
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Entry
KDW03_02500 CDS
T08758
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
Organism
taqu
Thermospira aquatica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_23
HTH_Crp_2
HTH_38
HTH_11
MarR
HTH_28
HTH_AraC
HTH_Tnp_ISL3
CdhC
Sigma70_r4
HTH_3
YihI
LacI
MarR_2
Fe_dep_repress
TrmB
HTH_Tnp_4
Sigma70_r4_2
HTH_17
HTH_10
HTH_29
HTH_5
Phage_terminase
VGCC_beta4Aa_N
Motif
Other DBs
NCBI-ProteinID:
URA10692
LinkDB
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Position
complement(498787..500085)
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AA seq
432 aa
AA seq
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MKQQLIQDQRQILMPLLVQQMEILTLPLPELREKLREEAEKNPLIKLENPVPEGGKWRLK
RQSFLTAPDFVFENAADTKGLLDHLREQIHFAGWSEREEEIAMLLLTSLDTNGFLRQDVK
DLIQGTDYTLEEVEQIRQKIMRLDPEGLASRGVHEFLVFQAEETFGPESLEARLLKEVPD
LLEKRLYSHIRKYYKLSEENLQKVLENLAELKPVPVTGWGESAMTIIPEAFVDVEGDKIS
IRLNEYYIPDVRLDQYYLSLAENEKLSREDKKFLKNNLNSAKTLIENLESRKEIVYRVIH
ALVEYQKDFFIKGARYQKPLRLRDIAEELGIHESTVSRVVKDKYIQVQGKVIPLKQFFSA
SVKNVSQEDVSTKSIHDMIRQIVAQEDKADPLSDEQIVSILENKGIKVSRRTVAKYRGIL
GIPPAHARREYR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcaacttattcaggatcagcgccagattttgatgcctctgcttgtccaacag
atggagattttaacgcttcctctgccggagctcagggagaaattaagagaagaagcggaa
aaaaatccccttataaagcttgaaaatccggtaccagagggtggaaaatggcgattaaaa
cgtcagtcttttctgacagcccccgattttgtttttgaaaatgcagcagatacaaaaggc
ctccttgaccatctgcgtgaacaaatccattttgcgggttggagtgagagagaagaagaa
atagccatgcttcttcttacctctttagataccaatggttttttgcgtcaggatgtgaaa
gatctcatccaggggaccgattatacccttgaagaggtagaacagattcggcaaaagatt
atgcgccttgatcctgagggacttgcttcacgtggggtgcatgagtttcttgtttttcag
gcggaggagacctttggtcccgagagtctggaggctcgtttactcaaggaggttcccgat
cttctcgaaaaacgtttatattctcatataagaaaatattacaagttgtcggaggaaaac
cttcaaaaagtgcttgaaaacctcgcagaactcaagcctgtgcctgtgactgggtgggga
gaatcggcgatgacgattattcctgaagcgtttgtcgatgttgagggggataagatctct
attcgtttaaatgaatactatattcctgatgtacggttggatcagtattatctctcacta
gcagaaaatgagaaattatctcgagaggacaaaaagtttttgaaaaacaatctaaacagc
gcgaaaacattgatcgaaaacctggaaagccgcaaggaaatagtttatcgcgtaattcat
gccctggttgaataccaaaaagacttttttattaagggggcacgttatcagaagcccctt
cgtttgcgggatatcgcggaggaactgggtattcatgaatccacggtgagccgggtagta
aaagataagtacattcaggttcaaggaaaggtaatccctttgaagcagtttttttcagct
tcggtaaaaaatgtgtcccaggaagatgtttctacgaagagtattcatgacatgattcgc
cagatcgtagctcaggaggacaaggcagatcccttaagtgatgaacagatagtgagtatt
cttgagaacaaggggataaaggtatccagacggacggttgccaaatacagggggatactt
gggattccccctgcacatgctcgaagggagtaccgatag
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