Thermospira aquatica: KDW03_04770
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Entry
KDW03_04770 CDS
T08758
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
taqu
Thermospira aquatica
Pathway
taqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDW03_04770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taqu03019
]
KDW03_04770
03009 Ribosome biogenesis [BR:
taqu03009
]
KDW03_04770
Enzymes [BR:
taqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KDW03_04770
Messenger RNA biogenesis [BR:
taqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KDW03_04770
Ribosome biogenesis [BR:
taqu03009
]
Prokaryotic type
rRNA helicases
KDW03_04770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
NIR_SIR_ferr
DUF3213
CMS1
HEM4
Motif
Other DBs
NCBI-ProteinID:
URA11113
UniProt:
A0AAX3BFI9
LinkDB
All DBs
Position
complement(998687..1000237)
Genome browser
AA seq
516 aa
AA seq
DB search
MLFHELNISEAVSKAIHDMGFIEPSPIQKEAIPLLLDGHNVFGQAQTGTGKTAAFGIPMV
EKIEDKRTTQGLVLVPTRELAIQVSGELQRIAQYKKWMVILPIYGGQSIERQIRSLSRGI
HIVVGTPGRVLDHIARGTLHLDKVSFCTLDEADVMLDMGFIDDVREILSRIPPSAQKALF
SATLSPQIKALIQDFVDNPRFVTIPHKELTVPNISQFYYEVRESEKPQALTRVIDYYNPN
QTVVFVNTKIRVEELKEKLHAAGYEVEALHGDMKQTQREFVMKRFRAQHFDILLATDVAA
RGLDIENIDLVVNYDLPQDEEYYVHRIGRTARAGREGTAVTFVTLREIKRLKDIERYIKT
KIERKRLPSLEDIEKIQTRAVLDEIATVIEEGGLEKYLDILSEGLSEYESPEIAAALLKM
LMGETEQKETPSFDSPQTVRLFLTLGRESIDIRNLLAWISDNTGIRSQELGRITMRESFS
FVDVPRERLDDFLAGLDRKKYKGKTVRVEIAREKEK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcatgaactcaacatctcagaggctgtttccaaagccatccatgacatgggc
tttatcgaaccctctcccattcagaaggaagccatccctcttcttctcgatggtcacaat
gtctttggtcaggctcagaccggtacagggaaaacggcagcttttggtattcccatggtg
gagaaaatcgaggataaacgtaccactcagggactcgtcctggtccccacccgagagtta
gccatccaggtctctggagagctgcagagaatcgctcagtacaaaaaatggatggtaatc
ctccccatctatgggggacaatccattgagcgccagattcgctccctttcccgggggatt
catatcgtagttggaacaccgggacgcgttcttgatcatatagcgaggggaacacttcat
ctcgacaaagtatcattttgcactcttgatgaggctgatgtgatgcttgacatgggattc
atcgatgatgtccgggagatccttagccgcatcccaccatcagctcaaaaggcactcttc
tctgcaacgctttctccccagatcaaggcacttattcaagactttgtagacaacccaagg
tttgttaccatccctcacaaagaactcactgtgcccaatatctcccagttctactacgag
gttcgggaatctgaaaaaccacaagccctgaccagggtaatcgactactacaatcccaac
caaaccgtggtttttgtcaataccaaaatacgtgtcgaggagctcaaagaaaaactccac
gccgctggttatgaggtagaagctctccatggggatatgaaacaaacccagcgagagttt
gttatgaaacgtttccgcgctcaacatttcgatattcttttggccaccgatgttgctgca
cgagggcttgatattgaaaacattgatcttgtggtaaattacgatctccctcaggatgaa
gaatactacgtccatcgcattgggaggacagcgcgagcaggaagagaagggaccgccgtg
acattcgttacccttcgggagatcaaacgtctcaaagatatcgaacgctatatcaagaca
aagatcgaaagaaaacgtcttccctctcttgaagatattgaaaaaattcagacaagggca
gttcttgacgagattgccacggttattgaggagggtggactcgaaaagtatctcgatatt
ctcagcgaaggtctctctgaatatgaatcaccagaaattgccgccgcactgctcaaaatg
ctcatgggagaaacagaacaaaaagaaaccccatcgttcgattccccccaaaccgtaaga
ctttttctcacgcttggcagagaatctatcgatattcgaaatcttctcgcatggatttca
gacaacacaggcatacgcagtcaggaacttggccgcatcacgatgagggagagtttttcc
tttgttgatgttccccgtgaaaggctggacgatttcctggcaggacttgacagaaaaaaa
tacaaagggaaaaccgtccgcgttgaaatagcacgagaaaaagaaaaataa
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