Thermospira aquatica: KDW03_06595
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Entry
KDW03_06595 CDS
T08758
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
taqu
Thermospira aquatica
Pathway
taqu03030
DNA replication
taqu03430
Mismatch repair
taqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDW03_06595 (dnaE)
03430 Mismatch repair
KDW03_06595 (dnaE)
03440 Homologous recombination
KDW03_06595 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taqu03032
]
KDW03_06595 (dnaE)
03400 DNA repair and recombination proteins [BR:
taqu03400
]
KDW03_06595 (dnaE)
Enzymes [BR:
taqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDW03_06595 (dnaE)
DNA replication proteins [BR:
taqu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDW03_06595 (dnaE)
DNA repair and recombination proteins [BR:
taqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDW03_06595 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
URA09175
UniProt:
A0AAX3BAA9
LinkDB
All DBs
Position
complement(1377189..1380692)
Genome browser
AA seq
1167 aa
AA seq
DB search
MDFVHLHVHSHYSLLDGVSQIPALVKQVAQHKQRAVALTDHGNLFGAMEFYTKCEEYSKS
HPESPIKPILGCEFYVAPKSRFERDKDEKYYHLVLLAKDLTGYKNLLKLSSAGYLEGFYS
KPRIDHELLEMHHEGLVALSACLGGEIPSYILSEQTDKLHHTLEWYKELFGKDGFFLELQ
DQGINEQKIVNRELLKLSQKYQLPLVATNDAHYLSPQDSELQEVMFAIRDKTTLDDPKLQ
RYPTNQFYLKSTEEMFQIFGEVPESLHNTLLIAEMCTLKLSFNEMHTPIYPLPEGENAHS
YLTKLAKQGLINRFGVKNYEDVPEDYRQRLSTELDLIRYMEETKNIGFSNYFLIVRDFVH
FAKRHGIWVGPGRGSAAGAILSWVLEITQVDPIRYQLLFERFLNPERVSMPDIDIDFEDS
RRDEVKEYIRSKYGYNRTADIITFGMLKSRSTIRDVGRVLGIPLAEVDRIAKLIDPNESL
EEAMTHVPELDLLKNGTEIQKKWLAYSIRLDGNLRNLGTHASGLIISDVDLTDVVPLYKD
MSTGAISTQYEGSYLEKNGLLKMDILGLANLSIIKDTLDRVWHNHHIRLDIQNVPLDDQE
VYAVFSRGETKGIFQFESTGMTEYLKQLRPTCIDDLIAMNALYRPGPMDQIPAYIRRKQG
QEAIDCFHENLKPILESTYGIIVYQEQVMQIAQVMAGFSLGKADNVRRIMAKKKPEELDK
IRPDWIEGSIKNGYPKELAEKIFEILIPFSSYAFNKSHSAAYAILAYQIAYLKTHYRPEF
MASLLTANMSKTEDVQAYCEECTKAGITILPPDINHSRYIFQEIKTDNDRWAIRFGFGAI
KGMGEGFALAMEEEREKHGPFTSFENFLERMHTHQEFRRPVVEILLKAGAFDNLLGETRA
EKKALYLDQLDWYIDHYQEKTKDKANGIVGLFDELEEHHLPPVSSHKTRILSHQEEFLME
KEVIGFPLSQRFLSHYENQLKHLVWIPDPALSKIPPGITFTIWGYLAEISIRTTQRGKPF
ASFKLFYGNSSLKFSLFSPEYERFENLLKEGQFVLIRAQYNPGKDNQVYLNIVEMMPLDT
VLSNRFTLRSLHLLWEGQSHVIKSSLETLCQWTGQKENHGTIQLIFHILDKDRTSSIQAH
PRFGVKFLPELIEKIASLEGLQAFWFV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggattttgttcatcttcatgttcattctcactacagtctgcttgatggtgtaagtcag
atccctgctctcgtcaagcaagtagcccaacacaaacaaagagctgtggctctcaccgat
catggaaatctcttcggtgcgatggaattctacaccaagtgtgaagagtactccaagtca
catccagaaagccccatcaaacccattctgggatgcgagttttatgtagccccaaaaagc
cgttttgaaagagataaagacgaaaaatactaccaccttgttcttctcgctaaagacctc
accggctacaaaaacctcctcaaactctcctcggccggttacctggagggattttactcc
aaacctcgtatagaccatgaactacttgaaatgcaccatgaaggactcgtcgccctctct
gcctgtttagggggtgaaatcccaagctacatcctttcagaacaaaccgacaaacttcat
cataccctcgaatggtacaaggagcttttcggaaaagacggctttttcctcgaactgcag
gaccaggggatcaatgaacaaaagattgtcaaccgcgagcttctaaaactttcccaaaaa
taccagcttcctcttgtggccaccaatgatgcccattacctttctccacaagattctgaa
cttcaagaagtaatgttcgccatccgggataaaaccactcttgatgatcccaaactgcaa
cgctaccctaccaaccagttctatctcaaaagtaccgaagagatgttccagatttttgga
gaagttccagaaagtcttcataacacccttctcatcgcagaaatgtgtacgcttaagctt
tcctttaacgagatgcacactcctatttaccccctccctgaaggagaaaacgcccacagt
tatcttacgaaactcgccaaacaaggacttataaaccgtttcggtgttaaaaactacgaa
gacgttcctgaagattatagacagagactttccactgagcttgatctcatccgttacatg
gaggaaaccaaaaacatcggtttttccaattactttctcattgtccgtgatttcgttcac
tttgccaagcgtcatggaatctgggtaggaccaggacgcggttcagcagcaggggctatc
ctgtcgtgggttcttgaaatcacccaggtagatcccatacgataccagcttctctttgaa
cgcttcctcaatcccgagcgtgtcagcatgccagatatcgatattgactttgaggatagt
cgccgcgacgaagtcaaagaatacatcagaagcaaatatggctacaacagaaccgctgat
atcatcacttttggtatgctcaagagccgatccacaatacgagacgtaggaagggtattg
ggtatccctctcgcggaggtggaccgtattgccaaactcattgaccccaacgaatctctt
gaggaagccatgacccatgtgcctgaacttgacttactcaaaaacggaacagagatccag
aaaaagtggttagcgtactctatccgccttgatggcaacctcagaaacctcggaacccat
gcctcggggcttatcatctcagatgttgatctcaccgatgttgtccctctctacaaagat
atgagtacgggagccatttctacacaatatgaaggatcctacctcgaaaaaaatggtctt
ctcaaaatggatattcttggacttgccaacctgagtatcatcaaagatactcttgatcgc
gtctggcacaatcatcatatccgacttgatatccagaatgttcccctggatgaccaggaa
gtgtatgccgttttctcccggggagaaaccaaaggaatcttccagtttgaatccacaggg
atgacagaatacctcaagcaacttcgtcccacatgcattgacgatcttatcgccatgaac
gccctctatcggccaggtcccatggaccagatccccgcctatatccgacgaaaacaaggg
caagaagccattgactgtttccacgaaaacctcaaacccatcctcgaaagcacgtatggt
atcatcgtgtatcaggaacaggtgatgcaaatagcccaggtgatggctggtttcagtctc
ggcaaagcagacaacgtccgccgtatcatggccaagaaaaaaccagaggaactcgacaag
attcgtcctgactggatagaaggctccataaaaaatggctatccaaaggaacttgctgaa
aagatctttgagattctgattcccttttcctcgtatgcttttaacaaatcccactcggct
gcttatgctatccttgcctatcaaatcgcttacctcaaaacacactaccgcccagaattc
atggcgagccttctcactgccaacatgagcaaaaccgaagacgttcaggcttactgcgag
gagtgtacaaaagccgggatcaccatcctcccgccagacataaaccacagccgctacatc
tttcaggaaatcaaaacagacaatgaccgctgggctatacggtttggattcggcgccatc
aaaggcatgggagaagggtttgcccttgccatggaagaagaaagagaaaagcacggacct
ttcacaagctttgaaaactttcttgaaagaatgcacactcatcaggaattccggcgccct
gtagtagaaatccttctcaaagctggcgcctttgataatcttttgggagaaacacgagcc
gaaaaaaaggctctctaccttgaccaactggattggtatattgatcactatcaagaaaaa
actaaagataaagccaatggtattgttggtttgtttgacgaactcgaagaacaccatctt
ccccccgtttcctcacacaaaacccgtatcctctcccaccaggaagaatttctcatggaa
aaagaggttatcggtttccccctctcccagagatttctcagtcactacgaaaaccaactt
aaacatctcgtatggataccagacccggctctctcaaagattccccctggcattaccttc
accatctggggataccttgccgagatcagcatccgcaccacccagcgaggtaaacctttt
gccagcttcaaacttttttatggaaacagcagtctcaagttcagtcttttttcaccggaa
tacgaacgattcgaaaatcttctcaaagaaggccagtttgtccttattcgggctcagtac
aatccgggtaaagacaaccaggtatatctcaatatagtggaaatgatgccattagatacc
gtcctctcgaaccgttttaccctacgaagtcttcaccttctctgggaagggcaatctcat
gtgatcaaaagctcccttgaaaccctctgccagtggacaggccagaaagaaaaccatgga
accatccagcttatcttccatatcctggataaagacaggacctcctccatccaggctcat
cctcgttttggggtaaaattcctgcctgaactaatagaaaagatcgcctcccttgaaggg
ctccaggccttctggtttgtataa
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