Thermoplasmatales archaeon BRNA1: TALC_00022
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Entry
TALC_00022 CDS
T02532
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tar
Thermoplasmatales archaeon BRNA1
Pathway
tar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TALC_00022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tar03019
]
TALC_00022
03009 Ribosome biogenesis [BR:
tar03009
]
TALC_00022
04131 Membrane trafficking [BR:
tar04131
]
TALC_00022
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tar04147
]
TALC_00022
Messenger RNA biogenesis [BR:
tar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
TALC_00022
Ribosome biogenesis [BR:
tar03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
TALC_00022
Membrane trafficking [BR:
tar04131
]
SNARE
SNARE associated proteins
Others
TALC_00022
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TALC_00022
Exosome [BR:
tar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TALC_00022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_22
TIP49
AAA_14
AAA_33
nSTAND3
Mg_chelatase
NPHP3_N
AAA_28
RNA_helicase
IstB_IS21
Zeta_toxin
AAA_7
NACHT
Sigma54_activat
ABC_tran
AAA_24
AAA_25
TsaE
AAA_18
Parvo_NS1
DUF815
DUF5906
Bac_DnaA
ORC-CDC6-like
AAA_17
AAA_11
NB-ARC
AAA_3
AAA_30
AFG1_ATPase
AAA_19
ATPase_2
PhoH
Motif
Other DBs
NCBI-ProteinID:
AGI47037
UniProt:
M4YL05
LinkDB
All DBs
Position
complement(18173..20314)
Genome browser
AA seq
713 aa
AA seq
DB search
MELKAGEAGKGVARLDPALMDILKIKVGDIAIVTGNKKTAVKILRGAPEDENLGVIRIDG
STRRNAGVSIGDRVDVKKAEVKEATKITFSPTEELRLQGGEEYLAQALEGRAFAKGDILS
LNIMGNKMDLVVTSFTPAAEAVIIGAETKVKINAKPVSKEGMDVPKVSYDDVGGLGDAIR
QVREMIELPLKHPELFKRLGVEAPKGVLLHGPPGTGKTMLAKAVAGETSSNFISIGGPEI
VSKFYGESEGKLREIFKDAEENAPSIIFIDEIDSIAPKREETQGEEERRIVAQLLSLMDG
LNSRGRVVVIGATNRPNSIDEALRRPGRFDREIEIGVPDRNGRNEILQIHTRGMPLDKDV
DLGVIADKTHGYVGADLAALCREAAMAALRRVLPDVNTEDDTIPTEVLNSINVTMEDFRH
AMNGLTPSAMREVMVEKPNVKWEDIGALEDAKQQLKEAVEWPLKYSKVFAHMNAKPPKGI
LLYGPPGTGKTMLAKAVATESEANFISVKGPEFLNKYVGESEKAVRETFRKARQASPCVV
FMDEIDSIAPVRGIGDDTHVTENVVSQMLTELDGLEPMNNVVVIAATNRPDRIDPALLRP
GRFDKSILVGPPDKESRKSIFEIHVRGKPMDDNVDLDDIAERTEGCTGADIGAIVNEAVM
TAVRRLVASGSVPSQEEIDACKVTMDDLLKAVDKFGPKAKERVSTYGNKAEDL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtggagctcaaggcgggggaggccggcaaaggcgtcgccaggctcgaccctgctctgatg
gacatcctcaaaatcaaggtcggggacatcgcgattgtcaccggcaacaagaagaccgcg
gtcaagatcctccgcggcgcccccgaggacgagaacctaggggtcatccgcatcgacgga
tccaccaggcgcaacgccggcgtgtccatcggcgacagggtcgacgtgaagaaggcagag
gtcaaggaggcgaccaagattaccttctccccgacggaggagctcaggctccagggcggg
gaggaatatctggcacaggccctggaaggacgcgccttcgcaaagggggacatcctctcc
ctgaacatcatgggcaacaagatggaccttgtggtcacgtccttcaccccggcggccgaa
gccgtgatcatcggtgccgagaccaaggtgaagatcaacgccaagcccgtctccaaggag
ggcatggacgtcccgaaggtttcctacgacgatgtgggagggctcggagacgccatccgc
caggtcagggagatgatcgagcttccgctgaaacaccccgagctcttcaagaggctgggg
gtcgaggccccgaagggcgtgctcctgcacggtccgccgggaaccggtaagaccatgctc
gcgaaggctgtggcaggggagacctccagcaacttcatctccatcggtgggccagagatc
gtcagcaagttctacggagagtccgagggaaagctgagggagatcttcaaagatgcggag
gagaacgcacccagcatcatcttcatcgacgagatcgactccatcgcgcccaagagggag
gagacccagggagaggaggagaggcgcatcgtcgcccagctcctgtccctgatggacggt
ctgaactccagggggagggtggtcgtcatcggagccaccaacaggcccaacagcatcgat
gaggccctcaggaggcccggcaggttcgaccgcgagattgagatcggagtccccgaccgc
aacggaaggaacgagatcctccagatccacacccgcggcatgccactcgacaaggatgtc
gacctgggagtgatcgccgacaagacccacggatacgtgggagcggacctggccgcactc
tgccgcgaggcggccatggcggccctcaggagggtgctccccgacgtgaacaccgaggac
gacaccatacccaccgaggtgctgaacagcatcaacgtcaccatggaggacttccgccac
gccatgaacggactgaccccctccgccatgagggaggtcatggtcgagaagcccaacgtg
aagtgggaggacatcggagccctcgaggatgccaagcagcagctcaaggaggccgtggaa
tggccgctgaagtacagcaaggtcttcgcccacatgaacgcgaaacccccgaaggggatc
ctactgtacggtccgccgggaaccggtaagaccatgctcgcgaaggcagtggccaccgag
tcggaggccaacttcatctccgtcaaggggccggagttcctcaacaagtacgtcggagag
tccgagaaggccgtcagggagacgttcaggaaggccaggcaggcatcgccctgcgtggtg
ttcatggacgagatcgactccatcgccccggtaaggggcatcggggacgacacccacgtg
accgagaacgtcgtctcccagatgctgaccgaactggacggcctggaacccatgaacaac
gtggtggtcatcgcagccaccaaccgtcccgacaggatcgaccccgctctgctgaggccc
ggaaggttcgacaagtccatcctcgtgggtcccccggacaaggagtccaggaagagcatc
ttcgagatccatgtccgcggaaagcccatggacgacaacgtcgacctggacgatatcgcc
gagagaaccgagggctgcaccggtgcggacatcggcgccatcgtcaacgaggcggtgatg
accgcggtcaggaggctggtggcctccggcagcgtcccctcccaggaggagattgatgcc
tgcaaggtcaccatggacgacctcctgaaggccgtggacaagttcggccccaaggcgaag
gagcgcgtgagcacctacggcaacaaggccgaggacctctga
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