Thermoplasmatales archaeon BRNA1: TALC_00179
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Entry
TALC_00179 CDS
T02532
Name
(GenBank) Rad3-related DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tar
Thermoplasmatales archaeon BRNA1
Pathway
tar03022
Basal transcription factors
tar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TALC_00179
09124 Replication and repair
03420 Nucleotide excision repair
TALC_00179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tar03021
]
TALC_00179
03036 Chromosome and associated proteins [BR:
tar03036
]
TALC_00179
03400 DNA repair and recombination proteins [BR:
tar03400
]
TALC_00179
Enzymes [BR:
tar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TALC_00179
Transcription machinery [BR:
tar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TALC_00179
Chromosome and associated proteins [BR:
tar03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TALC_00179
DNA repair and recombination proteins [BR:
tar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TALC_00179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
HBB
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGI47193
LinkDB
All DBs
Position
155057..156934
Genome browser
AA seq
625 aa
AA seq
DB search
MTRNGVFPYSYRPCQKAMVEFVRSGVAGDGTVVMESGTGTGKTAVSLSGAIEGRGRSARI
VYLTRTKSQQRQVALECRAISDNIPLISVAVQGRSASTCPMMAHDRDLSDGTPEELSRLC
SDLKKGDGPAGKCEYFEAMGSTQVEACISYIRTAHPDPEEFAEFCGAMGVCPYEMAKKVL
PYADVVSAPYPFFFIPAVRSRLMDWMGTAEKDVVAIIDEAHNLPEYLREIQTYTVTARSL
ELSRSEAEANGNPLLGSDVRATDLVDAVRDVMDDATDEFLTRENDPIPPDYLSTKLMSRF
SRSTVGIKNLFVLLHEAGMAIAEKKKAKRKLPRSHLATLALFILGWLECDDESHVFLIAG
GDNPSLEAYCLDPADAAEPLRLCRSSVSMSGTLEPLRNYAWELGLREPETETFPSPFPPE
NRRTVFVRDISTRYADLYGPGDTYGRLKDYVIGIVDAAKVNTAVFFPSYSLMERFIDDGV
DFALRRDVFYERAGSTQAELMDQVMGFRTTPGSVLFAVTGGRISEGLDFPGREMELAVIV
GIPYGRPSAKTDALIRYCQGRFGDGFGMAMKVPAVRKMRQAIGRLIRSENDRGIAVILDN
RVPTLPGLDAEPTDDPVADVRSFFE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggaacggagtgttcccgtactcctaccgcccgtgtcagaaggcgatggtggag
ttcgtccgcagcggagtagccggtgacggcaccgtggtcatggaatccggtacgggtacc
gggaagaccgccgtctcgctatcgggagccatcgagggaagggggaggtccgcgaggata
gtctacctcaccaggacgaaatcgcagcagaggcaggtggctctggagtgcagggcaatc
tccgacaacatccccctgatatccgtcgcggtccaggggaggagcgcgtccacctgcccc
atgatggcccacgacagggacctctccgacggtacgcccgaggagctctcccgcctgtgc
tccgacctgaagaaaggggacggcccggccgggaaatgcgagtacttcgaggccatgggg
agcactcaggtcgaggcctgcatctcctacatccgcacggcccaccccgatccggaggag
ttcgcggagttctgcggcgccatgggggtctgtccctacgagatggcaaagaaggtcctt
ccctacgccgacgtggtcagtgccccgtacccgttcttcttcatccccgccgtcaggtcc
cgcctgatggattggatgggcaccgccgagaaggatgtggtggcgatcatcgacgaggcc
cacaacctcccggagtatctgagggagatacagacctacaccgtgaccgccaggtccctg
gagctctcgcgttccgaggcggaggccaacggcaatcccttgctcggttcggacgtgcgc
gccacagacctcgtcgatgcggtaagggacgtaatggacgacgccacggatgagttcctg
accagggagaacgacccgatcccgccggattacctctccaccaagctcatgtcgaggttc
tccaggtccacggtggggatcaagaacctgttcgtcctgcttcacgaggcgggaatggcc
atagccgagaagaagaaggccaaaaggaagctcccacgttcccatttggctactctggca
ctgttcatcctgggatggctggagtgcgatgacgagtcccacgtgttcctaatcgcggga
ggggacaatccttcgctggaggcatattgtctcgatcccgcggatgcagcggagccgctt
cgcctgtgcaggtcctccgtgagcatgtccgggaccctggagccactgaggaactatgcc
tgggagctgggactccgcgagcccgagacggagacattcccctctccgttcccgccggag
aaccgcaggacggtcttcgttcgggacatctccaccaggtacgcggacctctacggtccc
ggggacacctacgggaggctgaaggattacgtcatcggcatcgtggacgcagccaaggtc
aacacggccgtgttcttcccctcgtattccctcatggagaggttcatcgacgacggagtg
gacttcgctctccgcagggacgtgttctacgagagggccggctccacccaggcggagctg
atggaccaggtgatgggattccgcacaactccgggcagcgtgctgtttgcggtgaccggc
ggaaggatcagcgagggcctcgacttccccgggagggagatggaactcgcggtgatcgtg
ggcatcccctacggcaggccgtccgccaagacggatgccctcatcaggtactgtcagggc
cgtttcggcgacgggttcggcatggcgatgaaagtgccagcggtcaggaagatgaggcag
gcgataggacgtctcatccgttcggagaacgacaggggcattgccgtaatcctggacaac
agggtgcccaccctcccgggtttggatgccgagcccacggacgatcctgtcgcggatgtc
cgctctttctttgaataa
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