Thermoplasmatales archaeon BRNA1: TALC_00327
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Entry
TALC_00327 CDS
T02532
Name
(GenBank) ribosomal RNA-processing protein RRP41/SKI6
KO
K11600
exosome complex component RRP41
Organism
tar
Thermoplasmatales archaeon BRNA1
Pathway
tar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TALC_00327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tar03019
]
TALC_00327
Messenger RNA biogenesis [BR:
tar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TALC_00327
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
TALC_00327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AGI47336
LinkDB
All DBs
Position
complement(290774..291517)
Genome browser
AA seq
247 aa
AA seq
DB search
MSGHTDMVLVNEEGIRIDGRRVDEKRNIKVEAGVLKNADGSCYLEVGKNKVLCAVYGPRE
CRMRHLQDPTKAVITVKYNMQTYSVSDRKRPGTDRRSVEISKLISEALESVVLTELFPRS
TIDIYIEILQANAGTRCAGLTAASVALADAGIPMRDIVPAIACGKADGHVLLDLNKEEDN
YGQADVPLAIIPSTDEIVLLQMDGNMTREELDYGLDMAFKAAHEVNDLQRDALLRRYNEK
AKKEEAE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacacacagacatggttttggttaacgaggaaggcatcaggatcgacggccgc
agggtcgacgagaaaaggaacatcaaggtcgaggccggcgtcctgaagaacgccgacgga
tcctgctacctcgaggtcggtaagaacaaggtcctctgcgcggtctacggacccagggag
tgccgcatgaggcacctgcaggaccccaccaaggcggtcatcaccgtcaagtacaacatg
cagacctactcggtctccgacaggaagaggccgggaaccgacaggaggtccgtcgaaatc
tccaagctcatcagcgaggccctcgagagcgtcgttctgaccgagctgttcccccgctcc
accatcgacatctacatcgagatcctccaggccaacgccgggaccaggtgcgccggtctc
accgccgcatccgtcgccctcgccgacgctgggatccccatgagggacatcgtccccgcc
atcgcctgcggcaaggcggacggccacgtcctcctcgacctcaacaaggaggaggacaac
tacggacaggccgacgtccccctcgccatcatccccagcaccgacgagatcgtcctgctg
cagatggacggcaacatgacccgcgaggagctggactacggactcgacatggccttcaag
gccgcccacgaggtcaacgacctccagagggacgcgctgctcaggcgctacaacgagaaa
gcgaagaaggaggaagcagaatga
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