Thermoplasmatales archaeon BRNA1: TALC_00465
Help
Entry
TALC_00465 CDS
T02532
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tar
Thermoplasmatales archaeon BRNA1
Pathway
tar03410
Base excision repair
tar03430
Mismatch repair
tar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TALC_00465
03430 Mismatch repair
TALC_00465
03440 Homologous recombination
TALC_00465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tar03400
]
TALC_00465
DNA repair and recombination proteins [BR:
tar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TALC_00465
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TALC_00465
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TALC_00465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH_CID
DHH
Motif
Other DBs
NCBI-ProteinID:
AGI47467
LinkDB
All DBs
Position
410389..411792
Genome browser
AA seq
467 aa
AA seq
DB search
MSPKLVDELRRAASLLRKAGSVRIVTHIDADGISAGSIAALAVQRLGIPHTLVFEKKITD
PVIEGINSCPEDVVWICDLGSAYMSQFTRNGIVVTDHHVPDGKWRSGQSFLDSFRASYQM
NPHLYGLNGSYEVCGAGMTYLLAKEIDPRNIDLAYLAVVGAVGDFQDTRESRLVSWNRMI
LEDAVSNGDVSVEKGIRYFGRESRPIAQFLEHGEDPRAEGLSDDRDGCLALLEGYGIEQF
AEDGTRRTWADLDASERAVLTDAVSERIPDEADRARLVGEVYTVNRYELHSGLHDVKEFS
TVLNSCGRYDDAETGARLCMGDLSALKDAERNRRDHRKNISVALQMVKDNHLIRRRKYLQ
YFDAGTDIRETVVGIVAGMVLSSDEADPYLPIIAFAAADDGIKVSARASRPLISKGLDLS
QIMKDAAEAVGGLGGGHSVAAGATIPEGTQERFLDEVEKLVSRQISS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgaagctcgtggacgagctccggagggccgcctccctcctgaggaaggcgggc
agcgtacgcatcgtcacacacatcgatgccgacgggatctccgcgggatccatagccgcc
ttggcggtgcagaggctcgggatcccccacaccctggtcttcgagaagaagatcaccgac
cccgtgattgaggggataaattcctgcccggaggacgtagtgtggatctgcgacctgggg
tccgcatacatgtcccagtttaccaggaacgggatagtcgtgaccgaccaccacgtcccc
gacggaaagtggaggtctggacagtcgttcctggattccttcagggcatcctaccagatg
aacccccacctctacggcctgaacggctcgtacgaggtctgcggtgcggggatgacctat
ctcctggcgaaggagatcgacccccggaacatcgacctggcgtacctggcggtcgtgggt
gccgtgggggacttccaggacacccgcgaatccaggctggtgagctggaaccgcatgatc
ctggaggatgccgtctccaacggcgacgtctccgtggagaaggggatccgctacttcggg
agggaatcccgcccaatcgcacagttccttgagcacggggaggacccccgtgcggagggg
ttatccgacgacagggacggatgtctggcactgttggagggatacggcatagagcagttc
gccgaggacggtacgaggcgcacctgggccgatctggatgcctccgagagggcggtactg
acggacgccgtctcggagaggatccccgacgaggcggaccgcgcccgtctggtgggcgag
gtgtacaccgtcaaccgctacgagctccattcaggactgcatgacgtgaaggaattctcg
acggtcctgaattcatgcgggagatacgacgacgcggagaccggcgccaggctctgcatg
ggggacctatcagccctcaaggatgccgagaggaaccgccgcgaccaccgtaagaacatc
tccgtcgccctgcagatggtgaaggacaaccacctgatccgcaggaggaagtacctccag
tacttcgatgctggcactgatataagggaaaccgtcgtgggcatcgtggcggggatggtc
ctgagctcggacgaggcagacccctacctccccataatcgctttcgcagccgccgacgac
ggcatcaaggtctccgccagggcttcccgcccgctgatctcgaagggactggacctctcc
cagatcatgaaggatgccgccgaggccgtgggaggcctgggcggaggccacagcgtggca
gccggggccaccatccccgagggtacccaggagaggttcctggacgaggtcgagaagctg
gtctccaggcagatctcgtcgtga
DBGET
integrated database retrieval system
