KEGG   Thermoplasmatales archaeon BRNA1: TALC_00518
Entry
TALC_00518        CDS       T02532                                 
Name
(GenBank) flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tar  Thermoplasmatales archaeon BRNA1
Pathway
tar03030  DNA replication
tar03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TALC_00518
   03410 Base excision repair
    TALC_00518
   03450 Non-homologous end-joining
    TALC_00518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tar03032]
    TALC_00518
   03400 DNA repair and recombination proteins [BR:tar03400]
    TALC_00518
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tar04147]
    TALC_00518
DNA replication proteins [BR:tar03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TALC_00518
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     TALC_00518
DNA repair and recombination proteins [BR:tar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TALC_00518
Exosome [BR:tar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   TALC_00518
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc DUF6360 Lip_prot_lig_C
Other DBs
NCBI-ProteinID: AGI47518
UniProt: M4YNZ9
LinkDB
Position
complement(458809..459837)
AA seq 342 aa
MGVNLSDLVEPRNVELSELSGKKVAVDTYNIAYQFMSAIRQPDGQPLCDHDGRITSHLTG
LLYRTANLVEAGIEPTFVFDGKPHDLKSRTLRERDERREKAKEEWQEAMDRGDIETARAK
AQQTSRMTKEVRESAKELIGYMGFPMVQAPSDGEQQASYMCRRGDVYGAASQDFDSLLFG
TPVLIRNLTMNGRRKVPGKQLYKEIKTEVIDSAEFLGNLGITREQLVDMCMLIGTDFNEG
IRGIGPKKALKYIRDNGTLENALSKIGTDIPDKDEIRAIFLSDEGSDDYSTAFKPIDREA
VVNMLTGYDFSEDRVKSALDRIENARKEQEKARRQRSLDSWF
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgggagtcaacctttccgacctcgtcgagccccgcaacgtggagctctccgagctctcg
ggcaagaaggtcgccgtcgacacctacaacatcgcataccagttcatgagcgccatccgc
cagccggacggacagcccctgtgcgaccacgacggccgcatcacctcccatctgaccgga
ctgctgtaccgcaccgcgaacctcgtggaggcgggcatcgaacccaccttcgtattcgac
gggaagccccacgacctcaagtcgaggacactcagggaaagggacgagaggagggagaag
gccaaggaggagtggcaggaggccatggatagaggggacatcgagaccgcccgcgccaag
gcccagcagacctcccgcatgaccaaggaggtccgcgaatccgcgaaggagctcataggc
tacatgggattccccatggtgcaggccccctccgacggggaacagcaggcatcctacatg
tgccgcaggggagatgtgtacggagcggcgagccaggatttcgattcgctcctgttcgga
acccccgtcctcatcaggaacctgaccatgaacggcaggaggaaggtccccggcaagcag
ctctacaaggagatcaagaccgaggtcatcgactccgcggagttcctcgggaacctcggg
atcaccagggagcagctcgtggacatgtgcatgctcatcggcaccgatttcaacgagggc
atcaggggcatcggcccgaagaaggccctgaaatacatcagggacaacggcaccctggag
aacgccctctccaagataggaacggatatccccgataaggacgagatccgcgcaatcttc
ctctccgacgagggctcggacgactattccacagcgttcaaacccatcgacagggaggcc
gtggtgaacatgctcaccggatacgacttcagcgaggaccgcgtgaagtccgccctcgac
aggatcgaaaatgccaggaaagaacaggagaaggccaggaggcagaggtctctggactcc
tggttctga

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