Thermoplasmatales archaeon BRNA1: TALC_00787
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Entry
TALC_00787 CDS
T02532
Name
(GenBank) Rad3-related DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tar
Thermoplasmatales archaeon BRNA1
Pathway
tar03022
Basal transcription factors
tar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TALC_00787
09124 Replication and repair
03420 Nucleotide excision repair
TALC_00787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tar03021
]
TALC_00787
03036 Chromosome and associated proteins [BR:
tar03036
]
TALC_00787
03400 DNA repair and recombination proteins [BR:
tar03400
]
TALC_00787
Enzymes [BR:
tar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TALC_00787
Transcription machinery [BR:
tar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TALC_00787
Chromosome and associated proteins [BR:
tar03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TALC_00787
DNA repair and recombination proteins [BR:
tar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TALC_00787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
ResIII
DEAD
Helicase_C
ATPase
nSTAND3
AAA_19
AAA_30
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AGI47783
LinkDB
All DBs
Position
718737..720704
Genome browser
AA seq
655 aa
AA seq
DB search
MTEGGEWVAPTRAPKVVKNENKDAPYLPYEPRELQIDIISDIRSALDQSRHIVIESGTGT
GKTIVSLAGSLEHAKRTGKKVVYITRTISQSDQVMKELRAINTIKPVSGITLTGRSKSCP
LLMARPDFENLSPSALSTLCSDRKQKSQQNRAGGCPYFDKTLPQIDNIERYCKKEFPRSD
ELDIYCKNSGACPYEAKKAMMKDFDVIVAPYIHMIDPAIRDNFFQNLGMDEKDIVLIVDE
AHNLMDAVREQESFTISSRLMSSALDECMAFNKPPVSSTMTLDDFVRAVRRVVKGLASKK
IPLGEKEAMLEPREFETALASESGTDVTGLRSIVEKLTELGEKRQEAIADTDSPDSPLLD
FAILLGKWVKSPEDRYIKVVRTNEEGEFIQASCIDPADVPAFLRKLPGAVHMSGTLQPLA
QYARVMGLPDNTLPRKYPSPFPKENKKVVYATDVTSEFKTLKENPSMQKRLDDYVIRLCN
SIDGNTLVFMPSYRVLKLMQPALEDGIDKPLYWELSGRQRQTMKNLDAFRSGRNGVFVCV
MGGSIAEGMDFPGDQLCFAVIVGMPYAPPSLEIKAMKDMFDKRYGPGTGWKYTGEIPAVR
KIRQAIGRLIRTETDRGMAVILDSRAARNARELEATPTQDPVGEAIMFFKGPRKG
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggaggggagtgggtcgcacccaccagggccccgaaggtcgtcaagaacgag
aacaaggatgccccgtacctcccctacgagccacgcgagctccagatagacatcatctcg
gacatcaggagcgccctcgaccagtcgaggcacatcgtcatcgaatccgggacgggtacc
gggaagaccatcgtctccctggcaggttccctcgagcatgcaaagaggacggggaagaag
gtcgtctacatcacgaggaccatctcccagtccgaccaggttatgaaggaactcagggcg
atcaacaccatcaagcccgtgtccggtatcaccctcacgggaaggagcaagtcctgcccc
ctgctcatggcgagacccgatttcgagaacctctccccttcggctttgtccacactctgc
agcgacaggaagcagaagagccagcagaaccgcgccggagggtgcccctacttcgacaag
actcttccccagatcgacaacatcgagaggtactgtaagaaggagttcccccgttcggac
gagctcgacatctattgcaagaacagcggtgcctgcccctacgaggccaagaaggccatg
atgaaggatttcgacgtcatcgtcgctccctacatccacatgatcgaccccgccatccgc
gacaacttcttccagaacctggggatggatgagaaggacatagtgctcatagtggacgag
gcgcacaacctcatggacgccgtccgcgagcaggagagcttcacgatatcctcgaggctc
atgtcatccgccctggacgagtgcatggccttcaacaagcccccggtgtccagcaccatg
accctcgacgacttcgtacgcgcggtgaggagggtggtcaagggactggcctccaagaag
atcccgctgggggagaaggaggccatgctcgagccgagggagttcgagaccgcccttgcc
tctgaatcaggtaccgacgtgaccggtctgaggtccatcgtcgagaagctcacggaactg
ggagagaagaggcaggaggcaatcgccgataccgattcccccgactccccgctgctagat
ttcgccatccttctcgggaaatgggtcaagtcccccgaggacaggtacatcaaggtcgtc
cgtacgaacgaggagggcgagttcatacaggcatcctgcatcgatcccgccgacgtcccc
gcattcctcaggaagctgccgggggccgtccacatgtccggtacccttcagcctctggcg
cagtatgccagggtcatggggctgcccgacaacaccctcccgaggaagtacccctcgccc
ttccccaaggagaacaagaaggtggtctacgcaaccgacgtcacctccgagttcaagacc
ctgaaggagaacccctcgatgcagaagagactggacgactacgtcatcaggctctgcaac
tccatcgacgggaacaccctcgttttcatgcctagctaccgcgtcctgaagctcatgcag
cccgctctcgaggacggcatcgacaagcccctttactgggagctttcgggccgccagagg
cagacgatgaagaacctggatgccttcaggagcgggaggaacggcgtattcgtgtgcgtg
atgggaggttccatagcagaggggatggacttccccggagaccagctctgcttcgcggtc
atcgtcggcatgccgtatgcccctccgtccctggagatcaaggccatgaaggacatgttc
gacaagaggtacggtcccgggacgggatggaagtacacaggagagatccccgcggtcagg
aagatccgccaggccatcgggcgtctcatcaggacggagacggacagggggatggccgtc
atcctggacagcagggccgcccgcaatgcaagggaattggaggctacacccactcaggac
cctgtgggggaggccataatgttcttcaaaggccctaggaagggttga
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