Thermoplasmatales archaeon BRNA1: TALC_01082
Help
Entry
TALC_01082 CDS
T02532
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tar
Thermoplasmatales archaeon BRNA1
Pathway
tar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TALC_01082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tar03019
]
TALC_01082
03009 Ribosome biogenesis [BR:
tar03009
]
TALC_01082
Enzymes [BR:
tar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TALC_01082
Messenger RNA biogenesis [BR:
tar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TALC_01082
Ribosome biogenesis [BR:
tar03009
]
Prokaryotic type
rRNA helicases
TALC_01082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
AAA_19
AAA_22
Helicase_C_2
MatB
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGI48073
LinkDB
All DBs
Position
980984..982432
Genome browser
AA seq
482 aa
AA seq
DB search
MKMISKFLDLGLTEDIAKALDEMGWDAPTPIQEEAVPRGLNGYDLIAQAQTGTGKTGTFG
TIILSKVPAKQRTPSAIVLTPTRELALQVAEEIGRMSKYTGHVCLPIYGGSGGAASIERQ
VDMLEKGVDIVAGTPGRVRDLIEREYLNLSAIRVIVMDESDRMLDMGFMEDVKFIFDACP
AERQMMMFSATMPEDIKMIAADYMKKPREINVSQDEVVLDNIKQYYISVGRRNKSWALAR
IIDIDNPKALIFCQTIKMVDMLEDRLKEYHYKVEALHGDMPQKKRERVMDDFRDGKVDIL
IATDVAARGLDVDDVNYVVNYDMPDMLDTYIHRIGRTGRAGKEGIAVSFVTSQEEYLVRE
FERRTGMDIVKRDVPEAEEGTKDTIRKVTDYDQLSDPFGMVRFEISLGKDDNIGKVKLAD
YIMRAGRIMDNAIGKIQLGKTKSMVEVHKDFGNRMLMDVPKMTFRGKKVRIRPLERGEEL
NE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatctccaaattcttagacctcggactgaccgaggatatcgccaaagcgctt
gacgagatgggctgggacgcacccacccccatccaggaagaggccgtcccccgcggactc
aacggatacgacctcatcgcacaggcccagaccggaaccggaaagaccggaaccttcgga
accatcattctcagcaaggtccctgcgaagcagaggaccccttcagccatcgtcctcacc
ccgacccgcgaactggccctccaggtcgcggaggagatcggacgcatgtcaaagtacacc
ggccacgtctgcctccccatctacggaggaagcggcggagccgcatccatcgagaggcag
gtcgacatgctcgagaagggcgtcgacatcgttgccggaacccccggaagggtcagggac
ctcatcgagagggagtacctgaacctctccgccatcagggtcatcgtcatggacgagtcc
gacaggatgctcgacatggggttcatggaggacgtgaagttcatcttcgacgcctgcccc
gcggagagacagatgatgatgttctccgccaccatgcccgaggacatcaagatgatcgcc
gcggactacatgaagaagccgcgcgagatcaacgtctcccaggacgaggtcgtcctggac
aacattaagcagtactacatctccgtcggccgtaggaacaagtcctgggcactcgctagg
atcatcgacatagacaatcccaaggcactgatcttctgccagaccatcaagatggtcgac
atgctcgaggacaggctgaaggaataccactacaaggtggaggccctccacggcgacatg
ccccagaagaagagggagcgcgtcatggacgacttccgcgacggcaaggtggacatcctc
atcgccaccgacgtcgccgccaggggtctcgacgtggacgacgtgaactacgtcgtcaac
tacgacatgccggacatgctcgacacctacatccaccgcatcggaaggacaggcagggcc
ggaaaggagggtatcgcggtatcattcgtcacctcccaggaggagtatctcgtccgcgaa
ttcgagcgccgcaccggcatggacatcgtcaagagggatgtgccggaggccgaggagggc
accaaggacaccatccgcaaggtcaccgactacgaccagctctccgaccccttcgggatg
gtcaggttcgagatctccctcgggaaggacgataacatcggcaaggtcaagctcgcggat
tacataatgagggcgggacgcatcatggacaatgccatcggcaagatccagctcggcaag
accaaatccatggtcgaggtccacaaagacttcggcaaccgcatgctcatggatgtcccc
aagatgaccttccgcgggaagaaggtccgcatccgcccgctcgagcgcggggaagaactc
aacgagtga
DBGET
integrated database retrieval system
