Thermoplasmatales archaeon BRNA1: TALC_01455
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Entry
TALC_01455 CDS
T02532
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tar
Thermoplasmatales archaeon BRNA1
Pathway
tar03410
Base excision repair
tar03430
Mismatch repair
tar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TALC_01455
03430 Mismatch repair
TALC_01455
03440 Homologous recombination
TALC_01455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tar03400
]
TALC_01455
DNA repair and recombination proteins [BR:
tar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TALC_01455
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TALC_01455
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TALC_01455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
DHH_CID
ENCP4
Motif
Other DBs
NCBI-ProteinID:
AGI48431
UniProt:
M4YUR0
LinkDB
All DBs
Position
1338219..1339574
Genome browser
AA seq
451 aa
AA seq
DB search
MDGFVLPDKLLSTLSNAAGTARSHDFIHVYSHYDADGLTAAAIVCKALMRAGKEFQVTTF
HTLTDPQMQIIEENRDACVLMTDLGASYIDRLEKLGGDVIVLDHHTLGVTNTEKVIYANP
HLYGIDGMTSGCGATMAFLFAITLDDRNWDLAPVAMAGIAGDRQHLNGVSGLNIYLLEGA
KKRELIEEMPGSLIPFGDLATELYVSTEPYIAGITGDADAVTAFLKEARTAPGKSFTDLA
PEEKVRLSSMIAVKLAQQGVTRDKLEETARTRYYLPTWNTDAESLSGWINSSGRSDEQGI
GILAGMGDRNALQRAKEIDAESRKNFLAGIKSAMEGKLHQMENIQWFDSSSSGFTGMICG
VIMSFIGDPDKPTIGINCSEEDANISSRGTFPLLDKGVDLADAMKRGCASVGGEGGGHRI
AAGGSIKSAKRDEFLANVDKIVGEQKVSHAM
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggacggattcgtccttccggacaaactactttccacactttccaacgctgcgggcact
gcccgcagccacgattttatccatgtctactcccactacgatgccgacggtctgacggct
gccgccatcgtctgcaaggcccttatgagggcgggcaaggagttccaggtcaccaccttc
cacacccttaccgacccgcagatgcagatcatcgaggagaacagggacgcctgcgtcctg
atgaccgacctcggcgcatcctacatcgaccgcctcgagaagctgggaggcgacgtcatc
gttctggaccaccacaccctcggcgtcaccaacaccgagaaggtgatctacgccaacccc
cacctctacggcatcgacggcatgacctccggatgcggagccaccatggccttccttttc
gccatcacccttgacgacaggaactgggacctggcccccgtcgccatggcgggcatcgcc
ggggacagacagcacctcaacggggtcagcggcctgaacatctacctgctggagggcgcc
aagaagagggagctcatcgaggagatgcccggctccctcatacccttcggggacctggcg
accgaactctacgtctccaccgagccctacatcgccggcattaccggcgacgcggacgcc
gtcaccgccttcctcaaagaggccaggaccgcccccggaaagagcttcaccgacctcgcc
cccgaggagaaggtcagactctcctccatgatcgccgtaaagctcgcccagcagggcgtc
acccgcgacaagctcgaggagaccgccaggacccgttactatctccccacctggaacacc
gacgccgagtccctctccggatggatcaactcctccggcaggagcgacgagcaggggatc
gggatcctcgcgggaatgggtgacaggaacgcactccagagggcgaaggagatcgatgcc
gagagccgcaagaacttcctcgccgggatcaagtccgcgatggagggcaagctccaccag
atggagaacatccagtggttcgacagctcctcctccggtttcaccggcatgatctgcggg
gtcatcatgagcttcatcggagacccggacaagcccaccatcgggatcaactgctccgaa
gaggatgccaacatctcctccagggggaccttccctctgctagacaaaggggtcgacctc
gccgacgccatgaaacgcggatgcgcgtccgtgggcggagagggcggaggacacaggatc
gccgcaggcggttcgatcaaatccgcgaagcgcgacgagttcctcgccaacgttgacaag
atcgtcggcgagcagaaggtcagtcacgccatgtga
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