Thermoplasmatales archaeon BRNA1: TALC_01520
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Entry
TALC_01520 CDS
T02532
Name
(GenBank) DNA-directed RNA polymerase, subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
tar
Thermoplasmatales archaeon BRNA1
Pathway
tar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TALC_01520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tar03021
]
TALC_01520
Enzymes [BR:
tar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TALC_01520
Transcription machinery [BR:
tar03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TALC_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
AGI48491
LinkDB
All DBs
Position
complement(1401221..1404076)
Genome browser
AA seq
951 aa
AA seq
DB search
MNNITKRIGSIKFSCLSPEEIRKMAAVKIITADTYDDEGHPIEQGLMDMHMGVIEPGLRC
KTCGCKVDECPGHFGYIDLAEPVTHVGFVKDIKMLLEATCRNPKCGRLMLTEEQIGKMQK
RMDSILEFGGDTIDQKVYSKEIAKEASNNTSCPICGADQMKIKLDKPTRFREVEPSHGKD
DNSPARSHDLTPKEIRARLELIPDDDLRVLGIDPATCRPEWMILTALAVPPVTVRPSITL
DSGDRSEDDLTHKLVDVLRINQRLRENRDAGAPQLIIEDLRELLQYHITTYFDNQTSGTP
PARHRSGRSLKTLAQRLKGKEGRFRSNLSGKRVNFSARTVISPDPNLSINEVGVPVIAAR
ELSVPMHVNERNIEKMREYVKRGPSPADDENGYVFGVNYVIRNDGRKIRVTPDNAETVAE
GLSIDYVVWRQLIDGDIVLFNRQPSLHRMSIMAHRVRVMKGRTFRFNLCVCAPYNADFDG
DEMNLHVLQSEEARAEARIIMQVQENILSPRYGGPIIGGIHDHISGSYFLTHGNPHFGKW
ETMNILMKLPEIEPPEPAGTDENGEPYWTGRQLFSLVLPDNFNIKFKSSITKSLDKDDPD
FDGLVIIRNGQLLEGTIDESAIGNSKGKILEKIARDYGSDRAAKFLNEVTRLALGTIMNH
GFSTGISDEDIPAEDLRQISTSSDDAIAKVDELIESFHDQTLEASQGGTAETTLENQIMK
VLGDARTTAGNIAGSKLGMSNPAVIMAKTGARGSMTNLSQMAGCVGQQTVRGERISRGYW
QRTLPHFPREDLGAYAKGFCKDSYKLGLTPTEFFFHAMGGREGLVDTAVRTSRSGYMQRR
LISALEDLKLTSDGTIRNTVGAIVQFKYGEDGVDPARSVRGKAIDIDDLFFEVLGEDAEK
LVDVNAKENQGDSYGEREKDLDAIEYDNDFDSDGDEDSTDYESDGDDYGGE
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatcaccaagaggatcggatcgatcaaattctcctgtctgtcccctgaggag
atcaggaagatggcagcggtgaagatcatcaccgccgatacctacgacgatgagggacac
cccatcgagcagggtctcatggacatgcacatgggagtcatcgagcccggcctccgctgc
aagacctgcggatgcaaggtcgacgagtgtcccggacacttcggatacatcgacctggcc
gagccggtcacccacgtcggcttcgtcaaggacatcaagatgctcctcgaggccacctgc
cgcaatcccaagtgcggaaggctcatgctcaccgaggagcagatcgggaagatgcagaaa
cgcatggactcgatcctcgagttcggcggcgacaccatcgaccagaaggtctactccaag
gagatcgcgaaggaagcgtccaacaacacctcctgtcccatctgcggcgcggatcagatg
aagatcaagctcgacaagcccaccaggttcagggaggtcgagcccagccacggcaaggac
gacaactcccccgccaggtcccacgacctgacccccaaggagatccgcgccaggctcgag
ctcatccccgatgacgacctcagggtcctgggaatcgaccccgcgacctgcaggcccgag
tggatgatcctcaccgcactcgccgtgcccccggtcaccgtcaggccctccatcaccctg
gattccggagacaggtccgaggacgacctcacccacaagctggtcgacgtcctcaggatc
aaccagaggctcagggagaaccgcgacgcgggagcgccccagctcatcatcgaggacctc
cgcgagcttctccagtaccacatcaccacctacttcgacaaccagacctccgggaccccg
cccgcaaggcacaggtccggacgttccctcaagaccctggcccagaggctcaagggtaag
gagggaaggtttaggtccaacctgtccggtaagcgtgtgaacttctccgcccgtaccgtc
atctcccccgacccgaacctctccatcaacgaggtcggagtcccggtcatcgccgcccgc
gagctctccgtgcccatgcacgtcaacgagcgcaatatcgagaagatgagggagtacgtc
aagcgcggacccagtcccgccgacgacgagaacggatacgtcttcggagtcaactacgtc
atcaggaacgacggccgcaagatcagggtcacccccgacaacgcggagaccgtcgccgag
ggactcagcatcgactacgtcgtctggaggcagctcatcgacggcgacatcgtcctgttc
aacaggcagccctcgctgcacaggatgtccatcatggcgcaccgcgtcagggtcatgaag
ggaaggaccttcaggttcaacctctgcgtctgcgccccgtacaacgccgacttcgacggc
gacgagatgaacctccacgtcctgcagtccgaggaggcccgtgccgaggcacgcatcatc
atgcaggtccaggagaacatcctgtcccccaggtacggaggacccatcatcggaggaatc
cacgaccacatctccggttcgtacttcctcacccacggcaacccgcacttcggaaaatgg
gagaccatgaacatcctcatgaaactccccgagatcgagccccccgagccggcaggcacc
gacgagaacggagagccctactggaccgggaggcagctgttctccctcgtcctgcccgac
aacttcaacatcaagttcaagtcgagcatcaccaagagcctggacaaggacgacccggac
ttcgacggcctggtcatcatccgcaacggacagctcctcgagggaaccatcgacgagtcc
gccatcgggaactccaagggaaagatcctcgagaagatcgccagggactacgggtccgac
cgcgcagccaagttcctcaacgaggtcaccaggctcgcgctcggtaccatcatgaaccac
ggattctccaccggaatctccgacgaggacatccccgccgaggacctgaggcagatctcc
acctcgtccgacgacgcaatcgcgaaggtcgacgagctcatcgagtccttccacgaccag
accctcgaggcctcccagggaggaaccgcggagaccaccctcgagaaccagatcatgaag
gtcctcggagatgcccgtaccaccgcgggtaacatcgcgggatccaagctcggtatgtcc
aaccccgcggtcatcatggcgaagaccggtgcccgtggatccatgaccaacctgtcccag
atggcaggatgcgtcggacagcagaccgtccgtggagagaggatctccagaggatactgg
cagaggaccctgccccacttccccagggaagacctgggagcctacgccaagggattctgc
aaggactcctacaagctgggtctcacccccaccgagttcttcttccacgcaatgggagga
agagagggtctcgtcgataccgccgtccgtaccagcaggtccggatacatgcagaggagg
ctcatcagtgccctcgaggacctgaagctaacctccgacggaaccatcaggaacaccgtc
ggcgccatcgtccagttcaagtacggagaggacggcgtcgaccccgcaaggtccgtccgc
ggaaaggccatcgacatcgacgacctgttcttcgaggtcctcggagaggacgccgagaag
ctcgtcgacgtcaacgccaaggagaaccagggagacagctacggagaacgcgagaaggac
ctcgacgccatcgagtacgacaacgacttcgactccgacggagacgaggactccaccgac
tacgaatccgacggcgacgactacggaggtgagtga
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