Thermoplasmatales archaeon BRNA1: TALC_01524
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Entry
TALC_01524 CDS
T02532
Name
(GenBank) ATPases of the AAA+ class
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tar
Thermoplasmatales archaeon BRNA1
Pathway
tar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TALC_01524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tar03019
]
TALC_01524
03009 Ribosome biogenesis [BR:
tar03009
]
TALC_01524
04131 Membrane trafficking [BR:
tar04131
]
TALC_01524
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tar04147
]
TALC_01524
Messenger RNA biogenesis [BR:
tar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
TALC_01524
Ribosome biogenesis [BR:
tar03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
TALC_01524
Membrane trafficking [BR:
tar04131
]
SNARE
SNARE associated proteins
Others
TALC_01524
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TALC_01524
Exosome [BR:
tar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TALC_01524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
RuvB_N
AAA_5
CDC48_N
TIP49
AAA_22
nSTAND3
AAA_2
AAA_28
AAA_33
AAA_14
Parvo_NS1
IstB_IS21
Mg_chelatase
RNA_helicase
CDC48_2
AAA_18
AAA_7
ATPase
AAA_24
Vps4_C
AAA_17
Sigma54_activ_2
AAA_25
Sigma54_activat
NPHP3_N
Cytidylate_kin2
AAA_30
SLFN-g3_helicase
TsaE
ABC_tran
Rad17
AAA_lid_PRS2_C
DUF815
MCM
Motif
Other DBs
NCBI-ProteinID:
AGI48494
UniProt:
M4YMX4
LinkDB
All DBs
Position
1408317..1410503
Genome browser
AA seq
728 aa
AA seq
DB search
MGTNSADLRVISPKRTSDIGFGKVWIDAGSFRSLGLPESGSFVTITGRRTATAFAEISDS
SQSGTVIIDGPTRTSAGASVNERVAVSPAVPREASRVTVAAVGGELTPDESFVRSFRSNI
AGRGFSPGQQFIVPNISLMGTDLTFRIERTDIDGPFVVTGNTDLKFSGGKDAVGRGGRAV
TYDDIGGLSREMERIRMMVEWPINHPELFSGLGITPPRGVLLYGPPGTGKTLIAEAIANE
SGASFYSVRGPELVGKYVGWSENNIRELFDRAAGNTPSIIFFDEIDSIASQRDGRSDDAY
RNMLSQILTCMDGLGSKDGVIVIGATNRPGDLDPAIRRPGRFDREIEIGIPDLAGRREIL
AIRTSGRGMPMADDVDLDRLAKMTQGFVGADITALAREAAMQALSRTIGSGSVDLVQSVP
DAVLSDIRVTMDDFVTALASVKPSGMREISGGIPEVSWADIGGMESVRREIMEDLLPGSN
REAFERLGISQGRGVLLYGPPGTGKTLIAKALANENGYNFIPVNGPELMGRFHGDTEEGI
RKVFDRAKSMAPSIIFFDEIDSVAPMRGADGGRSYDSMVAQLLTCLDGVSELKDVLVLAA
TNRPDMIDPAVLRPGRIDRMILIGKPDERARLSILKVCSAKMPLNSVDLAQIAGMTDGYV
GADLAAVCREAGLSAFHRGSDAVGQEDFESALEKVRPSVDQKTAEAYEKLRGEIRKSRDR
WANNPLYG
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgaactccgccgacctccgcgtgatatcgccgaagcgcacctccgacatcggt
ttcgggaaggtgtggattgacgccggttcgttccgttctctgggcctcccggagtccggg
agcttcgtcacgatcaccggcaggagaaccgccacggcctttgccgaaatatccgattct
tcccagtctggcactgttataatcgatggtcccacccgcacttccgcaggggcctccgtg
aacgagagggtcgcggtctccccggcagtcccgagggaggcttcccgcgtcaccgtagcc
gccgtcggcggcgagctgacccccgacgaatcgttcgtcagatctttcagatcgaacatc
gcaggccgcggattctcccccggccagcagttcatcgtccccaacatctcgctgatgggc
accgacctcaccttcaggatcgagagaaccgatatcgacggcccgttcgtagttaccggg
aacaccgatctgaagttctcgggcggaaaggatgcagtcggccgcggcggacgcgccgtc
acctacgacgacatcggaggactctccagggagatggagcgcatccgcatgatggtcgaa
tggcccatcaaccacccggaactgttctccggcctgggcatcacccctcccaggggcgtc
ctgctgtatggccctccgggaaccgggaagaccctcatcgccgaggcaatcgccaacgaa
tccggggcgagcttctacagcgtccgcggcccggaactggtcggaaagtacgtgggatgg
agcgagaacaacatccgcgagctgttcgacagggccgccgggaacactcccagcatcata
ttcttcgacgagatcgactcgatagcgtcccagagggacggcaggtccgacgacgcctac
cgcaacatgctctcacagatactgacctgcatggacggtctgggttccaaggacggcgtc
atcgtcatcggcgccaccaaccgccccggcgacctggaccccgctataagacgtccgggc
aggttcgacagggagatcgagatcggcatccccgacctggcgggcaggagagagatcctc
gccatacgcacctccggccgcggcatgcccatggcagacgacgttgacctcgacaggctc
gcgaagatgactcagggattcgtcggagccgacatcaccgccctggcaagggaggccgcc
atgcaggcgctttcccgcaccatcggttcgggctcggtggatctggtacagtccgttccc
gatgcagtactttcggatatcagggtgaccatggacgacttcgtgaccgccctcgcatcc
gtgaaacccagcggcatgagggagatctccggcggcatacccgaggtcagctgggcggac
atcgggggaatggaatccgtccgcagggagatcatggaggacctccttccgggcagcaac
cgcgaggcgttcgagaggctcggcatctcccagggcaggggagtcctgctctacggtccc
ccgggaaccgggaagaccctcatcgcaaaggccctagccaacgagaacggctacaacttc
atacccgtcaacggaccggagctcatgggaaggttccacggcgacaccgaggagggcatc
agaaaggtgttcgaccgggcgaagtccatggcccccagcatcatattcttcgacgagatc
gactccgtcgcacccatgaggggtgccgacggcggaaggtcctacgactccatggtcgca
cagctccttacctgcctggacggcgtgtccgagctcaaggacgttctggtcctggcggcc
acgaaccgtcccgacatgatcgaccctgcagtcctgcgccccggaaggatcgacaggatg
atcctcatcggtaagcccgacgaaagagccaggctctcgatcctgaaggtctgcagcgcg
aagatgcccctgaattctgtggacctggcacagatcgccggaatgaccgacggatacgtc
ggtgccgaccttgccgccgtctgccgcgaagcggggctcagcgctttccacaggggttcc
gacgccgtcggacaggaggatttcgaatccgccctggagaaagtgcgcccctccgtcgat
cagaagaccgcggaagcgtacgaaaaactgcgcggagagatcaggaagagcagggacaga
tgggccaacaatccgctctacgggtga
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integrated database retrieval system
