Thermoplasmatales archaeon BRNA1: TALC_01547
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Entry
TALC_01547 CDS
T02532
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tar
Thermoplasmatales archaeon BRNA1
Pathway
tar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TALC_01547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tar03400
]
TALC_01547
Enzymes [BR:
tar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
TALC_01547
DNA repair and recombination proteins [BR:
tar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TALC_01547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
Motif
Other DBs
NCBI-ProteinID:
AGI48513
UniProt:
M4YR42
LinkDB
All DBs
Position
complement(1430505..1431323)
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AA seq
272 aa
AA seq
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MRFGPAGYPKVSGKSDPEASLKYTRELGLDALEVEFVRGARISEERAKAVGKVAKDLDIR
LSCHAPYFISFNSESPETIDKSVDWVVETAVAAHNLGAYLIVIHAAAYGKHPETATENVI
KGLRRSKDRLDDLGIKDVILGVETMGKQGQFGTLKEIAQVMDSVDGVRPVLDVAHVHARG
IGCLKTEQDMRALLSEFFPFAGETAHFHISCIKYGQKGEISHLPLSERDPDMQILADILN
DSKQDCNFICESPLIEQDAVVFRDMFPRFRRQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcggaccggcaggctatcccaaggtttctggaaagagcgatcccgaggcatcc
ctgaaatacaccagggagctggggctcgatgcgctcgaggtggagttcgtccgcggtgcg
cgcatctccgaggagagagccaaggcagtcggcaaggtggcgaaggacctggacatcagg
ctcagctgccacgcgccgtacttcatcagcttcaattccgagagcccggagactatcgac
aagagcgtggactgggtggtggagaccgcagtggccgcccacaacctcggagcgtacctc
atcgtcatccatgcggccgcctacggaaagcacccggagaccgctacggagaacgtcatc
aagggactccgcaggtccaaggaccgtctagacgatctcgggatcaaggatgtgatcctg
ggagtggagaccatgggaaagcagggtcagttcggaacccttaaggagattgcccaggtc
atggattccgtcgacggcgtccgtcccgttctggatgtcgcccatgtgcatgccaggggg
attgggtgccttaagaccgagcaggacatgcgtgccctcctcagcgagttcttcccgttt
gcgggggagaccgcgcacttccacatcagctgcatcaaatacgggcagaagggggagatc
tcccacctgcccctctcggagagggacccagacatgcagatcctggcggacatcctgaac
gactctaagcaggactgcaatttcatctgcgaatcccctctgatcgagcaggatgccgtg
gtgttcagggacatgttccccaggttcaggcgccagtga
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