KEGG   Tardiphaga sp. vice278: FNL53_15970
Entry
FNL53_15970       CDS       T11730                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
tarc  Tardiphaga sp. vice278
Pathway
tarc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:tarc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FNL53_15970
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:tarc02022]
    FNL53_15970
Two-component system [BR:tarc02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   FNL53_15970
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_2 AAA_5 AAA_16 Mg_chelatase AAA MCM bpMoxR AAA_22 AAA_14 AAA_33 FleQ SSNA1 AAA_7 ABC_tran P-loop_TraG
Other DBs
NCBI-ProteinID: QDM17270
LinkDB
Position
complement(3380284..3381654)
AA seq 456 aa
MANDILIVDDEADIRDLVAGILDDEGFSTRTARDSDSALGEISNRRPNMVFLDIWLQGSK
LDGLQLLEQIKRDHSELPVVMISGHGNIETAVAAIKRGAYDFIEKPFKADRLILVANRAL
ETSRLKREVKELKQLAPVASSLTGRSAAMNQLRQTIDRAAKANSRILIVGPSGAGKELAA
RTLHNASQRSEGPFVVINAAAITPERMELELFGIEQSNGEQARKAGALEEAHGGTLFLDE
IGDLPRETQNKILRVLVDQTFTRAGGTTKVHVDVRIISSTARNLEEEIAEGRFREDLYHR
LSVVPIRVPPLSEHREDIPDLIEYFMEQISVATGLPKRQIGQDAMAVLQSHVWPGNVRQL
RNNVERVMILAGGGPEVIITADMLPQDVGSMVPSMPTSNNGEHIMGLPLREAREVFERDY
LIAQISRFSGNISRTAEFVGMERSALHRKLKALGVG
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggccaatgacattctgatcgtcgatgacgaagccgacatccgcgaccttgtcgcgggc
attctcgacgacgagggattctccacgcgcacggcgcgcgacagcgattcggcgctcggc
gaaatctccaatcgccggcccaatatggtattcctcgacatctggctgcagggcagcaag
ctcgacgggctgcaactgcttgagcagatcaagcgcgaccactccgaattgccggtcgtg
atgatctccggccacggcaacatcgagaccgcggtcgcggcgatcaagcgcggcgcctat
gacttcatcgaaaaaccgttcaaggccgaccggctgatcctggtcgccaaccgcgcgctg
gaaacctccaggctgaagcgtgaggtcaaggagctgaagcaactggcgccggtggcgagc
tcgctgaccggccgttccgccgcgatgaaccagttgcgccagaccatcgatcgcgccgcc
aaggccaacagccgcatcctgatcgtcggcccctccggcgccggcaaggaactggccgcg
cgcacgctgcacaacgcctcccagcgttccgaaggcccgttcgtcgtcatcaatgcggcg
gcgatcacgccggagcggatggagctcgaactgtttggcatcgagcagtcgaacggcgaa
caggcgcgcaaggccggcgcgctcgaagaggcccatggcggcacgctgttcctcgacgaa
atcggcgatctgccgcgcgagacccagaacaagattcttcgcgtccttgtcgatcagacc
ttcacgcgggcagggggcaccaccaaggtgcatgtcgacgtccgcatcatttcctcgacc
gcgcgtaatctcgaggaagagatcgcggagggtcgtttccgcgaggacctctatcatcgg
ctgtccgtggtcccgatccgggtgccgcctttgtccgagcaccgcgaggatattccggat
ctgatcgaatatttcatggagcagatctcggtcgccacgggtctacccaagcgccagatc
ggtcaggacgcgatggccgtgctgcaatcgcacgtctggcccggcaatgtccgccagctc
cgcaataacgtcgagcgtgtcatgattctcgccggcggcggcccggaggtgatcatcacc
gccgacatgctgccgcaggatgtcggctcgatggtgccgtcgatgccgaccagcaataat
ggcgagcacatcatgggcctgccgctgcgcgaagcccgcgaagtgttcgagcgcgattat
ctgatcgcgcagatctcgaggttctcgggtaacatctcacgcactgccgaattcgtcggc
atggagcgctcggcgctgcaccgcaagctcaaggccctcggcgtcggttaa

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