Tardiphaga sp. 709: RSO67_00285
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Entry
RSO67_00285 CDS
T10683
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tard Tardiphaga sp. 709
Pathway
tard03030
DNA replication
tard03430
Mismatch repair
tard03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSO67_00285 (dnaE)
03430 Mismatch repair
RSO67_00285 (dnaE)
03440 Homologous recombination
RSO67_00285 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tard03032
]
RSO67_00285 (dnaE)
03400 DNA repair and recombination proteins [BR:
tard03400
]
RSO67_00285 (dnaE)
Enzymes [BR:
tard01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSO67_00285 (dnaE)
DNA replication proteins [BR:
tard03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSO67_00285 (dnaE)
DNA repair and recombination proteins [BR:
tard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSO67_00285 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WNV09676
LinkDB
All DBs
Position
50767..54249
Genome browser
AA seq
1160 aa
AA seq
DB search
MSQKPAAASNAGFVHLHVHSAYSLLKGSIKIQKLAELAKADHQPALALTDSDNMFGALEF
SEKLVGYGIQPITGCEVAIDFGDQDPNARNALNAVMPRIVLLAAKERGYQSLMKLNSRAF
LETPVNHAPHIKLEWLLEETEDLIALSGGPDGPINQALLADQSALAAARCDRLGSLFGDR
LYIELQRHGAEKERRAEAGLIDLAYAKGLPLVATNEPYFAAADDYEAHDALLCIAGGRII
AETDREQLTTDHRFKTRAEMAVLFADIPEALASTVEIAERCSFRPKTRKPILPRFTVGAG
SNAEGAAQEESDELRRQAEEGLRKRLEIHGVSQGKSEEEYHARLDFELNVISRMNYAGYF
LIVSDFIKWAKAQGIPVGPGRGSGAGSLVAWVLTITDLDPLQFNLLFERFLNPERVSMPD
FDIDFCQDRRGEVISYVQQRYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTK
LVPQNPAAPVTLAAAIEGEPKLQALRDEDPIVAKAFDIAQRLEGLTRHASTHAAGIVIGD
RPLSQLVPMYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLKQRNIDV
NLATTPITDPKSYEMLARGEVVGVFQVESQGMRRALVDMRPDRFEDIIALVALYRPGPMA
NIPTYCARKHGDEEPEYLHPIIEPILKETFGVIIYQEQVMQIAQVMAGYSLGDADLLRRA
MGKKIRAEMEKQREIFVAGSVKNGVPKGQADTIFDLLAKFADYGFNKSHAAAYALVSYHT
AYMKAHYPVEFIAASMTLDMGNTDKLSEFRAEAQRLGIKVEAPNINRSGVTFEVSDNTIY
YALAALKGVGAGAVELIVAERNKNGLFTSLADFASRVSPRAVNKRIIETLAAAGAFDTLD
PHRARVHGGADAILAACQSAHVDTTIGQGNMFGGAADAPTIMLPQIDNWLAAEKLRKEYD
AIGFFLSGHPLDDYATALKRLRVQSWAEFCRAVKTGATAGRVAATVVSRMERRTKTGNKM
GIMGLSDPTGHFEAVLFSEGLAQYRDVLEPGTAVLLQLGAELQGEDVRARVLHAEPLDAA
AAKTQKGLRVTMKDTKALDSLVKRLQPQPSNAAGGGDVSLILRLDLQTEVEFKLEGRFQV
SPQIAGAIKAVSGVEMVETL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaagcccgccgccgcgtcgaatgccggatttgtccatctccacgtgcattcg
gcctattcgctgctgaagggctcgatcaagatccagaagctggcggaactggccaaggcc
gaccatcaaccggcgctggcgctgaccgacagcgacaacatgtttggcgcgctggaattc
tccgaaaagctggtgggctatggcatccagccgattaccggctgcgaggtcgcgatcgat
ttcggcgaccaggatcccaacgcccgtaatgcgctgaatgccgtgatgccgcgcattgtg
ctgctggctgccaaggagcgcggctatcagagcctgatgaaactcaactcgcgcgcgttt
ctggaaaccccggtcaatcatgcgccccatatcaagctggaatggcttctggaggagacg
gaagacctgatcgcgttgagcggcggtcctgacggtccgatcaatcaggcgctgcttgcc
gatcaatccgcgcttgccgctgcgcgctgcgaccggcttgggtcgctattcggcgatcgg
ctctatatcgaactgcagcgtcatggcgccgagaaggagcgccgcgccgaagccggtttg
atcgacctggcttacgccaagggcctgccgctggtggccacgaacgagccgtattttgct
gccgcggatgactatgaggcccatgatgcgctgctatgtatcgccggtggcaggatcatt
gccgagacggaccgcgagcagcttaccaccgatcatcgcttcaagacccgcgccgaaatg
gccgtgctgtttgccgacattcccgaggcattggcgtcaaccgtcgaaatcgccgagcgc
tgctcgttccggccaaagacgcgcaagccgatcctgccgcgcttcacggtgggcgccggc
agtaacgcggaaggcgcggcccaggaggaatccgacgagttgcgccgtcaggccgaggag
gggctgcgcaagcgtctcgagatccacggcgtgtcacagggcaagagcgaggaggaatac
cacgcccggctcgacttcgaactgaacgtcatctcccgcatgaactatgcgggttacttc
ctgatcgtgtcggacttcatcaaatgggcgaaggcgcagggcattccggtggggccgggc
cgcggttcgggcgctggctcgctggtcgcctgggtgctgaccatcaccgatctcgatccc
ttgcagttcaaccttctgttcgaacgcttcctcaatccggagcgcgtatcgatgccggac
ttcgacatcgacttctgccaggaccgccgcggcgaggtgatctcctatgtgcagcagcgt
tacggtcgcgatcaggtcgcgcagatcatcaccttcggtacgctgcaggcgcgcggcgtg
ttgcgcgacgtcggccgtgtgctgcagatgccctatggccaggtcgacaagctgaccaag
ctggtgccgcaaaatcccgccgcaccggtgacacttgcagccgcgatcgagggcgagccg
aaactccaggcgctccgcgacgaggatccgatcgtcgccaaagccttcgatattgcgcag
cgtctcgagggcctgacacgccacgcttcgacccacgcagcaggcatcgtgatcggcgac
cggccgctgtcgcaactcgtgccgatgtatcgcgatccgaaatcggacatgccggtcacc
cagttcaacatgaaatgggttgagccagcaggtctcgtgaagttcgacttcctcggcctg
aagacgctgacggtgctcgatgtcgccgtgaagctgctcaagcagcgcaatattgacgtc
aatcttgcgaccacgccgattaccgatcccaagagctacgaaatgctggcgcgcggtgaa
gtggtcggcgtgttccaggtggaaagccagggcatgcggcgcgcgcttgtggacatgcgc
cccgaccgtttcgaggacatcatcgcgctcgtcgcgttgtatcgtccgggcccgatggcg
aacatcccgacctattgcgcgcgcaagcatggcgatgaagagccggaatatctgcatccg
atcatcgagccgatcctgaaggaaaccttcggcgtcatcatctatcaggaacaggtgatg
cagatcgcgcaggtcatggccggctattcgctcggtgacgccgacctgctgcgccgcgcg
atgggtaagaagatccgcgccgaaatggaaaagcagcgcgagatcttcgtcgccggctcc
gtcaagaatggtgtgccgaaggggcaggccgatacgatcttcgatctgctggcaaaattc
gccgactatggcttcaacaagagccacgcggcggcctatgcgctggtgtcgtatcacacc
gcctatatgaaggcgcattatccggtggagttcattgcggcgtcgatgacgctcgacatg
ggcaacaccgacaagctgtcggaatttcgcgccgaggcgcagcggctcggtatcaaggtc
gaggcgccgaacatcaatcgttcgggcgtcaccttcgaggtcagcgacaacacgatctat
tatgcgctggccgcgttgaaaggcgtcggcgctggcgccgtcgagctgatcgtcgccgag
cgcaacaagaatggtttgttcacgtcgcttgccgactttgcgtcgcgcgtgagcccacgc
gcggtcaacaagcgcatcatcgaaacactcgctgcggccggcgccttcgatacgctcgat
ccacatcgtgcccgcgtgcatggcggcgcggatgctattttggccgcctgccagagtgcc
cacgtggatacgacaatcggtcagggaaacatgtttggcggcgcggccgatgcgccgacc
atcatgctgccgcagatcgacaactggctggcggcggagaagctgcgcaaggaatacgac
gctattggcttcttcctgtccggccatccgctcgatgactatgcgaccgccctgaagcga
ctgcgggtgcagagctgggccgagttctgccgcgcggtcaaaaccggcgctacggcgggc
agggtggcggctaccgtcgtgtcccgcatggagcggaggaccaaaaccggcaacaagatg
ggcatcatgggcctgtccgacccgaccggccatttcgaggcggtgctgttctccgaaggg
cttgcccaataccgcgacgtgctggaaccgggtaccgcggtgctgctgcaactcggcgcc
gaactccagggcgaggacgttcgggcccgggttctccacgcggagcctttggatgccgcc
gccgccaagacccagaaggggctcagggtgaccatgaaggacaccaaggcactggattcg
ctggtaaaacgcctccaaccgcagccgagcaatgccgccggcggaggcgacgtttcgctg
atcctgcgcctcgacctgcaaaccgaggtcgaattcaagctcgaaggccggttccaggtg
tccccgcagatcgccggcgccatcaaggcggtttccggggtggaaatggtcgaaacgctt
tga
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