Tardiphaga sp. 709: RSO67_05735
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Entry
RSO67_05735 CDS
T10683
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tard Tardiphaga sp. 709
Pathway
tard03020
RNA polymerase
Brite
Enzymes [BR:
tard01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RSO67_05735 (rpoC)
Transcription machinery [BR:
tard03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RSO67_05735 (rpoC)
DNA repair and recombination proteins [BR:
tard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RSO67_05735 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WNV10689
UniProt:
A0AA96PD20
LinkDB
All DBs
Position
complement(1099528..1103727)
Genome browser
AA seq
1399 aa
AA seq
DB search
MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGQLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEEEYLKAQDEYGQDSFTA
MIGAEAIRELLKGLELEKLDEQLRVEMKETESDIKHKKLAKRLKIVEAFRYSGNKPEWMI
LTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSTMRAGLPGENKLYREMAEIEHALH
AKVIHLHTKIKYSWSGLDADGKPVTRMVETTAGRAMLGQVLPKSPKMPFDVINKLMTKKE
ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPGSKWKIVDATRAF
AKDFEQQYNDGLITHGEKYNKVVDAWSKAGEEVAKEMMKEISSVKRNAAGEEAQINSIYM
MAHSGARGSPAQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIITQTDCGTNLGIKMRAIIDSGSVVASLASRILGRSA
CEDIRDPATNKVLIKRNTLMEEKDVDLLQQAGIQEVKIRSALTCELVNGICGTCYGRDLA
RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSVIESNFDGKITIKNENI
AKNGEGHMVAMVRNMVIAISDADGTERATYRIQYGARVHVANGDMIKRGQRIAEWDPYSR
PLLTEVDGTIGFEDLVDGQSIAETLDESTGIAKRVVTDWRSSRGGADLRPAIVIKGKDGK
VLKLARGGDARYMLSPDAILSVDVDAKVTSGDILARVSMESAKTRDITGGLPRVAELFEA
RKPKDAAIIAEIGGTIRFGRDYKNKRRISIEPLDKNEETREYLIPKGKQIHLQDGDIVEK
GDYIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEI
TDQGETDMISGEQIDKIEFDALNLKAKEEGKKIATGNPVLLGITKASLQTRSFFSAASFQ
ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAMKRDKMILDEREKQ
AAIVPSAPAEEPLMLPSAE
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaaattatgaatctcttcaatccgacgactccggctcaggtcttcgaccag
atccggatctcgattgcgtccccggagaagattctgtcgtggtcctacggcgagatcaag
aagccggaaaccatcaattaccgtaccttcaagcccgagcgcgacggcctgttctgcgcc
cgcatcttcgggcccatcaaggattacgagtgcttgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgagaagtgctcggtcgaagtgaccttgtcgcgcgtcagacgc
gagcgcatgggtcatatcgaactggccgctccggttgcgcatatctggttcctgaagtcg
ctgccgtcgcgcatcggccagttgctggacatgacgctcaaggatctcgagcgcatcctg
tactttgaatactacgtcgttctcgagccgggtctcaccgcgcttaaggaccgtcagctg
ctgtctgaagaagagtatctgaaggcgcaggacgaatacggccaggactcgttcaccgcg
atgatcggtgccgaggcgatccgtgaactgttgaagggtctggagcttgagaagctcgac
gagcagctgcgcgtcgagatgaaggagaccgaatccgacatcaagcacaagaagctcgcc
aagcgcctgaagatcgtcgaggccttccgctattccggcaacaagccggaatggatgatc
ctcacggtggtgccggtgatcccgccggatctgcgtccgctggtgccgctggatggcggc
cgcttcgcgacgtcggatctgaacgatctgtatcgccgcgtcatcaaccgtaacaaccgc
ttgaagcgtctgatggagctccgcgcgccggacatcatcatccgcaacgaaaagcgcatg
ctgcaggaggccgtcgacgcactgttcgacaacggccgccgtggccgtgtcatcaccggc
gccaacaagcgtccgctgaagtcgctggccgacatgttgaagggcaagcagggtcgtttc
cgtcagaacctgctcggcaagcgcgtcgactattcgggccgttcggtcatcgtcgtcggt
ccggaactgcgtttgcatcagtgcggcctgccgaagaagatggcgctcgaactgttcaag
ccgttcatctattcgcgtctcgacgccaagggtctgtccaccacggtgaagcaggcgaag
aagctcgttgaaaaagaacgtcccgaggtctgggatattctcgacgaggtcattcgcgag
catcccgtgctgctgaaccgcgcgccgacgctgcatcgtctgggcatccaggcgttcgag
ccggtgctgatcgaaggcaaggcgatccagctgcatccgctggtctgctcggccttcaac
gccgacttcgacggcgaccagatggccgtgcacgttccgctgtcgcttgaagcgcagctg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgcatcccgcgaacggtcagccg
atcatcgtgccgtcgcaggacatcgtgctgggtctgtactacctgtcgaccatgcgtgcg
ggtctcccgggcgaaaacaagctgtatcgtgagatggcggagatcgagcatgcgctgcat
gcgaaggtcatccacctccacaccaagatcaaatacagctggtccggtctcgacgcggac
ggcaagccggtcacgcgcatggtggaaaccactgccggtcgtgcgatgctcggtcaggtt
ctgccgaagtcgccgaagatgcctttcgacgtcatcaacaagctgatgaccaagaaagaa
atctcgggcgtcatcgatcaggtctaccgtcactgcggtcagaaagagaccgtgatcttc
tgcgatcgcatcatggcgctcggcttctacaacgcgttcaaggccggcatctcgttcggc
aaggacgacatggtcgtgccgggttcgaagtggaagatcgtcgacgccacccgtgcgttc
gcgaaggacttcgaacagcagtacaatgacggcctgatcacccacggtgagaagtacaac
aaggtcgtcgacgcctggtcgaaggcgggtgaagaagtcgccaaggagatgatgaaagaa
atctcctcggtgaagaggaatgcggcgggtgaagaagcccagatcaactcgatctacatg
atggcgcattccggtgcccgtggttcgccggcccagatgcgtcagctcggtggtatgcgc
ggcctgatggccaagccgtcgggcgagatcatcgaaacgccgatcatctcgaacttcaag
gaaggtctgtcggttctcgaatacttcaactcgacccacggcgctcgtaagggcctcgcg
gacaccgcgttgaagaccgcgaactcgggctatctgacccgccgtctcgtcgacgtggcg
caggactgcatcatcacgcagaccgattgcggcaccaatctcggcatcaagatgcgcgcc
atcatcgactccggttcggtggtcgcatcgctggcgtcgcgtatcctgggtcgttcggcc
tgcgaagacattcgcgatcccgcgaccaacaaggtgctgatcaagcgcaacacgctgatg
gaagagaaggacgtcgatctgctccagcaggccggcatccaggaagtgaagatccgttcg
gctctgacttgcgaactggtcaacggcatctgcggcacctgctacggccgcgatctggcc
cgcggcacgcccgtcaaccacggtgaggccgtcggcgtcatcgcggcgcagtcgatcggc
gagcccggtacgcagctgacgatgcgtaccttccacatcggcggtgcggcgcagctcaac
gagcagtcggtgatcgagtcgaacttcgacggcaagatcacgatcaagaacgagaacatc
gccaagaacggcgaaggccacatggttgcaatggtgcgcaacatggtcatcgccatctct
gacgccgatggcaccgagcgtgcgacgtaccgtatccagtacggcgctcgcgttcacgtg
gccaacggcgacatgatcaagcgtggccagcgcatcgcggaatgggatccgtattcccgt
ccgctgctgaccgaagtcgacggcacgatcgggttcgaggacctggtcgacggccagtcg
attgcggaaacgctcgacgagtcgaccggtatcgccaagcgcgtcgttaccgattggcgt
tcgtcgcgtggcggtgcggatctgcgtccggccatcgtcatcaagggcaaggacggcaag
gtcctcaagctcgcacgtggcggcgatgcccgttacatgctgtcgcccgacgccattctg
tcggtcgacgtcgatgccaaggtgacctcgggtgacattcttgcccgtgtctcgatggaa
agcgcgaagacgcgtgacatcaccggcggtctgccgcgggtggccgaactgttcgaggcg
cgcaagccgaaggacgcggcgatcatcgcggaaattggcggcaccatccgctttggacgc
gactacaagaacaagcgtcgcatctcgatcgagccgctcgacaagaacgaggagacccgc
gagtacctcattccgaagggcaagcagatccatctgcaggacggcgacatcgtcgaaaag
ggcgattacatcgtcgaaggcaatccggcgccgcacgacattctggcgatcaagggcatc
gaggaactcgctgcctatctggtcaacgaaatccaggaagtttaccggttgcagggcgtg
ctcatcaacgacaagcacatcgaagtgattgtccgtcagatgctgcagaaggtcgagatc
accgatcagggcgagaccgacatgatctcgggcgagcagatcgacaagatcgagttcgac
gcgctgaacctgaaggcgaaggaagaaggcaagaagatcgcgaccggaaaccctgtgctg
ctgggcatcaccaaggccagcttgcagacccgttcgttcttctcggcagcgtcgttccag
gagaccacgcgcgtgctcaccgaagctgccgtcaacggcaaggtggacccgctcgaaggc
ctcaaggaaaacgtcattgtcggccgcctgatcccggccggtaccggcgcctcgatggcg
aagatccgcgaagtcgcaatgaagcgcgacaagatgatcctcgacgagcgcgagaagcag
gcggctatcgtgccgtcggctccggcagaagaaccgctgatgctgccgtcggccgagtaa
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integrated database retrieval system
