Tardiphaga sp. 709: RSO67_15505
Help
Entry
RSO67_15505 CDS
T10683
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
tard Tardiphaga sp. 709
Pathway
tard00630
Glyoxylate and dicarboxylate metabolism
tard00680
Methane metabolism
tard01100
Metabolic pathways
tard01120
Microbial metabolism in diverse environments
tard01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tard00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RSO67_15505 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
RSO67_15505 (fdhF)
Enzymes [BR:
tard01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RSO67_15505 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_Nqo3
Fer4
Fer4_10
Fer4_6
Fer4_9
Fer4_15
Fer4_21
Fer4_16
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
WNV06969
LinkDB
All DBs
Position
complement(3161138..3164047)
Genome browser
AA seq
969 aa
AA seq
DB search
MSLVHEIDFGTPRSKSEKMVTLTIDGQSVSVPEGTSIMRAAMEMGTQIPKLCATDMVDAF
GSCRLCLVEIEGRAGTPASCTTPAMDGLVVHTQNARLAALRKGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGYDGENHVFAKSGPKHTHNSPEACENDHWMAKDESNPYF
TYDPSKCIVCSRCVRACEEVQGTFALTISGRGFESRVSPGMSESFLGSECVSCGACVQAC
PTATLTEKAVIEIGQPEHSAVTTCAYCGVGCTFKAEMRGEELVRMVPYKDGKANRGHSCV
KGRFAWGYANHKERILNPMIREKITDPWQEVSWDEAFNFAAKKFKGIQAKYGKDSIGGIT
SSRCTNEEVFVVQKLIRAGFGNNNVDTCARVCHSPTGYGLSSTFGTSAGTQDFDSVEDTD
VVMIIGANPTDGHPVFASRLKKRLRAGAKLIVVDPRQTDIVRSAHIEAQHHLPLMPGTNV
AVLTALAHVIVTEGLADETFIRERCDWSEFEDWAAFVAQPNHSPEATAIMTGVDPKELRA
AARLFATGGNGAIYYGLGVTEHSQGSTTVIAIANLAMATGNIGRPGVGVNPLRGQNNVQG
SCDMGSFPHELPGYRHISGDAVREQFEAMWNVKLNSEPGLRIPNMFDAATEGTFMGLYVQ
GEDILQSDPNTKHVVAALSAMECVIVHDLFLNETANYAHVFFPGSTFLEKNGTFTNAERR
IQRVRKVMSPKNGLEDWEVTLGFAKALGYEMKYNHPSEIMDEIAALTPTFAGVSYAKLEE
VGSVQWPCNEKQPLGTPIMHMDGFVRGKGKFMLTEYIATDERTGPRFPLLLTTGRILSQY
NVGAQTRRTENVVWHEEDRLELHPHDAELRGIRDGDWVKLQSRAGETTLRALITERVAPG
VVYTTFHHPTTQANVITTEFSDWATNCPEYKVTAVQISPSNGPSEWQKEYDEQARQSRRI
AMPVVEAAE
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgttcacgaaatcgattttggtacgccgcgctcgaagtccgaaaagatggtc
acgctgaccatcgacgggcagagcgtctcggtgcccgagggcacctcaatcatgcgcgcc
gccatggagatgggcacgcagattccgaaactctgcgccaccgacatggtggatgccttc
ggttcctgccgcctctgtctcgtcgagatcgaaggccgcgccggcacgccggcctcctgc
accacgccggccatggacggcctcgtggttcatacccagaacgcgcggctcgcggcgctg
cgcaagggtgtgatggagctctatatctccgaccatccgctcgactgtctcacctgcgcc
gccaacggcgattgcgaattgcaggacatggccggtgcggtcggcctgcgcgacgtgcgc
tacggttatgacggcgagaaccatgtgttcgccaagtccggcccgaagcacacccacaat
tcgccggaagcctgcgaaaacgatcactggatggcgaaggatgagtccaatccgtacttc
acctacgacccctccaagtgcatcgtctgctcgcgctgcgtccgcgcctgcgaagaagtt
cagggcactttcgcactgacgatctccggccgcggtttcgagagccgcgtttcgccgggc
atgagcgagagcttcctgggttcggaatgcgtctcctgcggcgcctgcgtgcaggcctgt
ccgaccgcgacgctgaccgagaaggccgtgatcgagatcggccagcctgagcactccgct
gtgaccacctgcgcctattgcggcgtcggctgtaccttcaaggcggaaatgcgcggcgag
gagctggtgcgcatggtgccgtacaaggacggcaaggccaatcgcggccattcctgcgtc
aagggccgtttcgcctggggctatgcgaaccacaaggagcgcatcctcaatccgatgatc
cgcgagaagatcaccgatccatggcaggaagtgtcatgggatgaggccttcaatttcgcg
gccaagaagttcaagggcattcaggccaaatacggcaaggactcgatcggcggcatcacc
tcgtcacgctgcaccaatgaagaagtcttcgtcgtgcaaaagctgatccgtgccggcttc
ggcaacaacaatgtcgatacttgcgcgcgcgtctgccattcgccgaccggctacggcctg
tcctcgaccttcggcacctcggccggcacgcaggattttgactcggtggaagacaccgac
gtcgtgatgatcattggtgcgaacccgaccgatggccatccggtgtttgcgtcgcgcctg
aagaagcgtttgcgcgccggcgccaagctgatcgtggtcgatccgcgccaaaccgatatc
gtccgctcggcccatatcgaggcacagcaccatctgcccctgatgcccggcaccaatgtc
gccgtgctcaccgcgctggcgcatgtcatcgtcaccgaaggcctcgccgacgagactttc
atccgcgagcgctgtgactggagcgagttcgaagactgggcggcctttgtcgcgcagccg
aaccacagccccgaagccaccgccatcatgaccggcgtcgatccgaaggagctacgcgcc
gcggcccgtttgttcgccaccggtggcaacggtgcgatctattacggtctcggcgtcacc
gagcacagccagggttcgaccaccgtgatcgcgatcgccaacctcgcgatggcgactggc
aatatcggccgtccgggcgtcggcgtgaatccgctgcgcggccagaacaacgtgcagggt
tcctgcgacatgggctcgttcccgcacgagctgcctggctatcgccacatctcgggcgat
gcggtgcgtgagcagttcgaggcgatgtggaacgtcaagctcaacagcgagccgggcctg
cgcattcctaacatgttcgatgccgccaccgaaggcacgttcatgggcctctacgtgcag
ggcgaagacatcctgcagtccgaccccaacactaagcatgtggttgccgcgctgtcggcg
atggaatgtgtcattgtccacgacctgttcctgaacgagaccgcgaactacgcccacgta
ttcttcccgggctccaccttcctggagaagaacggcactttcaccaatgccgaacgtcgc
attcagcgcgtccgcaaggtgatgtcgccgaaaaatggtcttgaggactgggaagtgacc
ttgggattcgccaaggcactcggctatgagatgaaatataaccacccttcggagatcatg
gatgaaatcgcagcgctgacgccgactttcgctggtgtctcctatgcgaagctcgaggaa
gttggttcggtgcagtggccgtgtaacgagaagcagcctctgggcacgcccatcatgcat
atggacggcttcgtacgcggcaagggcaagttcatgctcaccgaatacatcgccaccgac
gagcgtaccgggccgcgcttcccgctgctgctcaccaccggccgtattctcagtcagtac
aatgtcggcgcgcagacacggcgcaccgagaatgtggtctggcatgaagaggatcgtctg
gagctgcatccgcatgacgccgagctgcgtggcatccgcgacggcgactgggtgaagctg
cagagccgcgccggcgagacgacgctgcgggcgctgatcaccgagcgcgtggcgccgggc
gtggtctatacgaccttccatcacccgaccacgcaggccaacgtcatcaccaccgagttc
tcggactgggccaccaattgcccggaatacaaggtgacggcggtgcagatctcgccctcg
aacggtccgtccgagtggcagaaggaatatgacgagcaggcccgccagtcgcgccggatc
gccatgcctgtcgtggaagccgcggagtag
DBGET
integrated database retrieval system
