Tardiphaga sp. 709: RSO67_18505
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Entry
RSO67_18505 CDS
T10683
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tard Tardiphaga sp. 709
Pathway
tard00300
Lysine biosynthesis
tard00470
D-Amino acid metabolism
tard01100
Metabolic pathways
tard01110
Biosynthesis of secondary metabolites
tard01120
Microbial metabolism in diverse environments
tard01230
Biosynthesis of amino acids
Module
tard_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tard00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RSO67_18505 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RSO67_18505 (dapF)
Enzymes [BR:
tard01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RSO67_18505 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF2924
Motif
Other DBs
NCBI-ProteinID:
WNV07516
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All DBs
Position
complement(3781356..3782228)
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AA seq
290 aa
AA seq
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MSALANHSFAKMNGIGNEIVVIDLRDTASGITPADARAVATPEGVPYDQLMVLQKPRLAG
TDAFVSIYNNDGSEAGACGNGMRCVARQTFAGGDKTALTFETRAGLINCWQGPAPDLYTV
DMGTPKFGWQDIPLAEEFRDTRGIELQIGPIDAPILHTPSVVSMGNPHAIFWVDDIQAYD
LEKFGPLLENHPIFPDRANITLAHIVDRDHIVMRTWERGAGLTKACGSAACATAVAAARL
RRTNRTVHMTLPGGELTIEWRESDDHVLMTGPAAFEYEGTFDPKLFASVA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcactggccaaccattccttcgccaagatgaacggcatcggcaacgagatcgtc
gtgatcgacctgcgcgatacggcatccggtattacgcctgccgacgcccgcgccgtggcc
acccccgaaggcgtaccctatgaccagttgatggtgctgcagaagccccggctggccggc
accgacgccttcgtctcaatctacaacaatgacggctccgaagccggcgcctgcggcaat
ggcatgcgttgcgtggcgcgccagacttttgccggcggcgacaagacggcgctcacattc
gagaccagggctggcctgatcaattgctggcaaggccccgcgccggacctttacacggtg
gacatgggcacaccgaagttcggctggcaggacattccgctggccgaggaattccgtgac
acccgcggcatcgagttgcagatcggcccgatcgacgcgccgatcctgcacaccccgtca
gtcgtctcgatgggcaaccctcatgcgatcttctgggtggacgacatccaggcctatgat
ctcgaaaagttcggcccgctgctggaaaaccacccgatcttcccggaccgcgccaatatc
acgctggcccatatcgtcgatcgcgatcacatcgtgatgcgtacctgggagcgcggcgcc
ggcctgaccaaggcttgtggctccgcagcttgcgcaaccgctgttgccgccgctcgcctg
cgccggaccaatcgaactgtgcatatgacgctgcccggcggtgaactcaccatcgaatgg
cgcgagagcgacgaccacgtgctgatgacggggccggccgcgtttgaatatgaaggcacg
ttcgatccgaagctgttcgcttcggtcgcgtaa
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