Tardiphaga sp. 709: RSO67_23500
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Entry
RSO67_23500 CDS
T10683
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
tard Tardiphaga sp. 709
Pathway
tard03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RSO67_23500 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tard03400
]
RSO67_23500 (xseA)
Enzymes [BR:
tard01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RSO67_23500 (xseA)
DNA repair and recombination proteins [BR:
tard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RSO67_23500 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
WNV08430
LinkDB
All DBs
Position
complement(4843340..4844941)
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AA seq
533 aa
AA seq
DB search
MPKAAAPLTNSPEFTVSELSSALKRTVEDTYGNVRVRGEISGFRGPHSSGHCYFSLKDES
AKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGVGALMALME
ERKRKLGAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVKV
QGEGSAEQVAAAIHGFNALPVGGTIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAESMI
PLISAVGHETDITLIDFAADKRAPTPTAAAEMAVPVRAELMVEISGFERRMMLCWQRGQE
SRRNELRAAARALPDLSELLAIPRQRLDGATASLPRALKANTHAHHRRFAQASAGLTLRV
LRAQIAHATQRLTVSGERLSLSARALLRQRRDRFTGLEARLKASKLANAQAQRNAITRDR
ERALRLTERARRALTTLVQRQQARVQASSQLLGALSYRSVLARGFALVRDEQGAALHAAA
NIGTGARLSIEFADGRVSVTADGDRTAPAPREAKPAAPAAPKKAPKIDQGSLF
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagccgccgcccccctcaccaattcccccgaattcaccgtctccgagctgtcc
tcagccctgaaacggacggtggaagacacttacgggaacgtgcgggtgcgcggcgaaatc
tcgggttttcgcgggccgcattcctccggccactgctatttctcgctcaaggacgagagc
gccaagatcgaggcggtgatctggaagggtgtccatggccggatgcggttcaagccgcag
gaaggcctggaagtcatcgccaccggcaagctgaccacctatcccggctcgtcgaaatac
cagatcgtcatcgaggccatcgaacccgccggcgtcggcgcgctgatggcgctgatggag
gagcgcaagcgcaagcttggcgcggaaggcctgttcgacgaagcacgcaagcagctgctg
ccgtggctgccggaagtgatcggcgtggtgacgtcgccgacgggcgctgtcattcgcgac
atcctgcatcggctggaagaccgcttcccgcgccgcgtgctggtctggcccgtcaaggtc
cagggcgaaggctcggccgaacaggtcgccgccgccatccatggcttcaatgcgctgccg
gtgggcggcacgattccgcggccggatctgctcatcgtcgcgcgcggcggcggctcgctg
gaagacctgtggtcgttcaacgaagagatcgtggtgcgagccgcggccgagagcatgatc
ccgctgatctcggcggtcggccacgagaccgatatcacactgatcgatttcgccgccgac
aaacgcgcgccgacgccgacagcggccgccgaaatggcggtgcccgtgcgcgccgaacta
atggtggagatatccggcttcgagcgccgcatgatgctgtgctggcagcgcggacaggaa
tcccgccgcaacgaactacgcgccgcagcgcgtgctctgccggatctcagcgaattgctc
gccatcccgcgccagcgtctcgatggcgcaaccgcatcgctgccgcgcgctctgaaagca
aatacacacgcgcatcatcgccgcttcgcgcaggccagcgcggggctgacgctgcgcgtg
ctgcgcgcacagatcgcccatgctacgcagcggctgacggtatcgggcgaacgcctgagc
ctctccgcgcgtgcattgcttcggcagcgccgcgatcgtttcactggccttgaagcacga
ttgaaggcctccaagctcgccaatgcgcaggcgcagcgcaatgccatcacgcgcgatcgg
gagcgcgctctgcgcctcactgagcgcgcgcgccgtgcattgacgacactggtgcagcgc
cagcaggcgcgcgtacaggcgtcgagccagttgctcggtgccctctcctatcgcagcgtg
ctggcccgcggcttcgcgctggtgcgcgacgagcaaggcgcggcgctgcatgccgccgcc
aatatcggaaccggcgcgcgcctgagcatcgaattcgccgatggccgcgtcagcgtgact
gccgatggcgaccgcacggcacctgctccgcgcgaggccaagcctgcggcgccggccgcg
ccgaaaaaggcgccgaaaatcgatcagggcagcctgttctag
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