Tardiphaga sp. 709: RSO67_23890
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Entry
RSO67_23890 CDS
T10683
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tard Tardiphaga sp. 709
Pathway
tard03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSO67_23890 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tard03400
]
RSO67_23890 (uvrB)
DNA repair and recombination proteins [BR:
tard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSO67_23890 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RSO67_23890 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
SWI2_SNF2
AAA_22
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
WNV08501
LinkDB
All DBs
Position
complement(4913763..4916777)
Genome browser
AA seq
1004 aa
AA seq
DB search
MAKKPDSPKKPTKSIKTPAAKPGAGRPDVKPIGPALAELLNPAINRGDAGMGSGTGLQPP
PSNSFERRSGGEAAVHRARKSTPKKFEGDEGMRPTPLQPFPQPVVAPYAPRLSEQKGLEE
APQANYNTSAAIPTLDPELARQLGYTTEEDDAAAMARPPRNKMEALGVQATADALEALVR
DGRPEFKDQKVWTPHRPPRPEKSEGGVRFELKSEYEPKGDQPTAIKELVEGIERNDRTQV
LLGVTGSGKTYTMAKVIEATQRPAIILAPNKTLAAQLYGEFKNFFPDNAVEYFVSYYDYY
QPEAYVPRTDTYIEKDSSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYTA
MTFALKKDERIDQRQLIADLVALQYKRTQHDFTRGTFRVRGDVIDIFPAHYEDRAWRVNL
FGDTVESIEEFDPLTGHKQDELEFIKIYANSHYVTPRPTLIQAMKSIKEELKWRLDQLHN
QGRLLEAQRLEQRTTFDLEMMEATGSCAGIENYSRYLTGRRPGEPPPTLFEYVPDNALVF
ADESHVTVPQIGGMFKGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDMMRPQSVAVSATP
SGWELQESGGVFVEQVIRPTGLIDPPINIRPARTQVDDLLGEVRATAAQGYRSLITVLTK
RMAEDLTEFLHEQGIRVRYMHSDIDTIERIEIIRDLRLGAFDALVGINLLREGLDIPECA
LVAVLDADKEGFLRSETSLIQTIGRAARNVDGRVILYADQMTGSMTRAIAETDRRREKQV
EYNTLHGITPESVKKSIGDIMNSVYEGDRVLVDIGGGMAEDAITIGHNFEAVLADLEVRM
REAAADLNFEEAARLRDEVKRLRATELAVVDDPTVKQRGVAARGGAYKGEKKYGDAANLP
ARLDKAAQGKARGKYGKSSSAGGASSKVHKPGLDEMGIANWHEVKPARGKEVQRPRKPTL
DEMGPGTESKIFQPKNSRESGPEFGPAPRSTGGAPGHRGGWKKR
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaacccgactctccgaaaaagcccacaaaatcaatcaagacacccgccgcc
aagcctggcgccggccgtcccgacgtcaagccgatcgggcccgcgctggcggaattgctg
aatcccgcaattaatcgcggcgatgccggcatgggctcgggcaccggcttgcagccgccg
ccgagtaattccttcgagcgccgctccggcggcgaggccgcggtgcatcgcgcgcgcaaa
tccacgccgaagaagttcgagggcgacgagggcatgcgcccgacgccgctgcagccgttt
ccgcagccggttgtcgcgccctatgcgccgcggctgagcgagcagaagggtctcgaggag
gcgccgcaggccaattacaacacctcggcggcgatcccgacgctggatccggaactggcc
aggcagctcggctacaccaccgaggaggacgacgccgcggcaatggcgcgcccgccgcgc
aacaagatggaagccttgggcgtgcaggccaccgccgatgcgctggaagcgctggtgcgc
gatggccgcccggaattcaaggaccagaaagtgtggacgccgcaccgtccgccgcgtccg
gagaaatccgaaggcggcgtgcgcttcgagctgaagtcggaatatgagccgaagggcgac
cagcccaccgcgatcaaggaactggtcgagggcatcgagcgcaacgaccgcacgcaggtt
ctgctcggcgtcaccggctccggcaagacctacacaatggccaaggtgatcgaggccacg
cagcgcccggcgatcattctcgcgccgaacaagacgctggccgcgcagctctatggcgag
ttcaagaacttcttccccgacaacgcggtcgaatatttcgtcagctattacgactactac
cagccggaagcctacgttccgcgcaccgacacctatatcgagaaagactcgtcgatcaac
gagcagatcgaccgcatgcgccattcggcgacgcgcgccctgctcgagcgcgacgacgtc
atcatcgtggcgtcggtgtcgtgcatctacggtatcggctcggtggaaacctataccgcg
atgaccttcgcgctgaaaaaggacgagcgcatcgaccagcgccagctcatcgccgacctc
gtagcgctacaatacaagcgcacgcaacacgatttcacccgcggcaccttccgcgtgcgc
ggtgacgtcatcgacatcttcccggcgcactatgaagaccgcgcctggcgcgtgaacctg
ttcggcgacaccgtggagagcatcgaggagttcgatccgctcaccggccacaagcaggac
gagctcgaattcatcaagatctacgccaactcgcattacgtgacgccgcggccgacgttg
atccaggcgatgaaatcgatcaaggaagagctgaagtggcggctcgaccagttgcacaat
cagggccgcctgctggaagcgcagcgcctcgagcagcgcaccaccttcgatctcgaaatg
atggaagccaccggatcgtgcgccggcatcgagaactattcgcgctatctcaccggccgc
cggcccggcgagccgccgccgactttgttcgaatatgtgccggacaatgcgctggtcttc
gccgacgagagccacgtcacggtgccgcagatcggcggcatgttcaaaggcgacttccgc
cgcaaggcgacgctggcggaatacggcttccgcctgccctcctgcatggacaaccgcccg
ctgcgcttcgaggaatgggacatgatgcgcccgcaatccgtcgcggtgtcggcgacgccg
tccggctgggagctgcaggaatccggcggcgtgttcgtcgagcaggtcattcgccccacc
ggcctgatcgacccgccaatcaatatccgcccggcgcgcacccaggtcgacgatctcttg
ggcgaagtccgcgccaccgcggcccagggctatcgttccctgatcaccgtgctcaccaag
cgcatggccgaagacctgacagagttcctgcatgagcagggcattcgcgtgcgctacatg
cactcggacatcgacaccatcgagcgcatcgagatcatccgcgacttgcgccttggcgcg
ttcgacgcgctggtcggcatcaatctcctccgcgaaggcctcgacattcccgaatgcgcg
ctggtcgccgtgctcgacgccgacaaggaaggcttcctgcgctcggagacctcgctgatc
cagaccatcggccgcgccgcgcgtaacgtcgacggccgcgtcattctctatgccgaccag
atgaccggttcgatgacgcgcgccatcgccgaaaccgatcgccgccgcgagaagcaggtc
gaatacaacacgctgcacggcatcacgccggagagcgtgaagaagtcgatcggcgacatc
atgaactcggtctatgaaggcgaccgcgtgctggtggatatcggcggcggcatggccgag
gacgccatcaccatcgggcacaatttcgaagccgtgctggccgatctggaagtgcggatg
cgcgaggccgcggccgacctgaacttcgaggaagccgcgcgcctgcgcgacgaggtcaag
cgcctgcgcgccaccgaactcgccgtggtcgacgatcccaccgtcaagcagcgcggcgtc
gccgcgcgcggcggcgcctataagggcgagaagaaatacggcgacgccgccaacctgccc
gcgcgtctcgacaaggccgcgcaaggcaaggcacgcggcaaatacggcaagagttcatca
gcgggcggcgcatcgtcgaaagtgcacaagccggggctcgacgagatgggcatcgcgaac
tggcatgaagtgaagccggctcgcggcaaggaagtgcagcgcccgcgcaagccgacactg
gacgagatgggacccggcaccgagagcaagatcttccagccgaagaattcgcgcgagtcc
ggaccggagtttggaccggcgccaagatcaaccggcggcgcgccggggcatcggggcggg
tggaagaagaggtag
DBGET
integrated database retrieval system
