Tardiphaga sp. 709: RSO67_24490
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Entry
RSO67_24490 CDS
T10683
Symbol
pimA
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tard Tardiphaga sp. 709
Pathway
tard00061
Fatty acid biosynthesis
tard00071
Fatty acid degradation
tard01100
Metabolic pathways
tard01212
Fatty acid metabolism
tard02024
Quorum sensing
tard04146
Peroxisome
Module
tard_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tard00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RSO67_24490 (pimA)
00071 Fatty acid degradation
RSO67_24490 (pimA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RSO67_24490 (pimA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSO67_24490 (pimA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tard01004
]
RSO67_24490 (pimA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tard04147
]
RSO67_24490 (pimA)
Enzymes [BR:
tard01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RSO67_24490 (pimA)
Lipid biosynthesis proteins [BR:
tard01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RSO67_24490 (pimA)
Exosome [BR:
tard04147
]
Exosomal proteins
Exosomal proteins of breast milk
RSO67_24490 (pimA)
Exosomal proteins of breast cancer cells
RSO67_24490 (pimA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WNV08613
UniProt:
A0AA96SWR7
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All DBs
Position
5037423..5039111
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AA seq
562 aa
AA seq
DB search
MTHPGEQHYPPGVTWDAPIARGTLPGLLANAAARYGDRTAIEFRDQPISFNDLQARVDVI
AAALMRAGYGKGSSIGIFLGNTPDHPVHFFGGLRAGARLVHLSPLDGEIALSHKLKDSGA
RVLVTSNLAALLPMALKFLDKGLLDRLIVCEDDDWGAVNNPQLPLPVNPAIVTFRNFTTG
VTLPAQWPEISPDDVALLQYTGGTTGLPKGAMLSHGNLTSAVSIYNMWGAPARAKRNRIE
RVICVLPLFHIYALTVILLSRISLGDTISLHQRFDVSRVLDDIEKKKATVFPGVPTMWIA
IAADPSLETRDLSSLASAASGGAPLPDEVARLFERKTGLSLKSGWGMTETCSPGTSHPPG
GLDKPGSIGLMLPGIEIDVVSLDDPTRVLGVNETGEIRIKGPNVTKGYWNRAQESAESFV
GDRFLTGDIGYMDEDGFFYLVDRKKDMIISGGFNVYPQMIEQAIYEHPSVQEVIVIGVVD
QYRGEAAKAFIKLRNGATPFTIEELRAFLTGKLGKHELPAMVEFVDDLPRTAVGKLSRHA
LRGLQPTPIISQQQTASGGSRP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcccggcgagcagcattacccacccggtgtcacttgggacgcacccattgca
cgcggcacgctgccgggcttgctggcgaacgcggccgctcgctatggcgaccgcaccgcc
atcgaatttcgtgatcagccaatctcgttcaacgacctgcaggcgcgcgtcgatgttatt
gccgccgcgctgatgcgcgccggctacggcaaaggctcctccatcggcatcttccttggc
aatacgccggatcatccggtccacttcttcggtggcctcagggccggcgcgcgtctcgtg
catctgtcgccgctcgatggcgagatcgcgctgtcgcacaagctgaaagactccggcgca
cgcgtgctcgtgacgagcaaccttgcggcgttgctgccgatggcgctgaagtttctcgac
aagggcctgctcgacaggctgatcgtctgcgaagacgacgactggggtgcggtgaacaat
ccgcagctgccgctgccggtaaatcccgcgattgtcactttccgcaatttcacgacgggc
gtgacactgcctgcgcagtggcccgagatttcaccggatgacgtcgcgctgctgcaatat
accggcggcaccaccggcttgccgaaaggcgcgatgctcagccacggcaatctcacctcg
gcggtctcgatctataatatgtggggcgcgccggcgcgggccaagcgcaatcggatcgag
cgcgtcatctgcgtgctgccgctgtttcatatctatgcattgaccgtgatcctgctgagc
cgcataagcctcggcgacaccatctcgctgcatcagcgcttcgacgtcagccgcgtgctc
gacgatatcgagaagaagaaagccaccgtatttcccggcgtgcccaccatgtggatcgcc
atcgcggccgatccttcgctggaaacgcgtgatctgtcgtcgctggcctcggcggcctcc
ggtggtgcgccgctgccggacgaggtggcacgtctgttcgaacgcaagaccggcctgtcg
ttgaagagcggctggggcatgaccgagacctgctcgcccggcaccagccatccgcccggt
ggccttgataagccgggctcgatcggcctgatgctaccggggatcgagattgacgtggtg
tcactcgatgacccgaccagggtgctcggcgtcaacgagaccggcgaaatccggatcaag
gggccgaacgtcaccaaaggctactggaaccgcgcgcaggagagtgccgaatcctttgtc
ggcgatcgcttcctcaccggcgatatcggctacatggatgaggacggattcttctatctg
gtcgatcgcaagaaggacatgatcatctccggcggcttcaacgtctacccgcagatgatt
gagcaggcgatttacgaacatccttccgtacaggaagtgatcgtgatcggcgtcgtcgat
caatatcgtggtgaagcggccaaggccttcatcaagctgcgcaatggcgcaacgccgttt
accatcgaagagttgcgcgcatttctcaccggcaagctcggcaagcatgaactgccggcg
atggtcgaattcgtcgacgatttgccgcgcaccgcagtcggaaaactctcgcgtcacgcc
ttgcgtggcctgcaacccacgcccatcatcagtcaacaacaaaccgcctccggaggatct
cgcccatga
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