Tardiphaga sp. 709: RSO67_27615
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Entry
RSO67_27615 CDS
T10683
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tard Tardiphaga sp. 709
Pathway
tard00061
Fatty acid biosynthesis
tard00071
Fatty acid degradation
tard01100
Metabolic pathways
tard01212
Fatty acid metabolism
tard02024
Quorum sensing
tard04146
Peroxisome
Module
tard_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tard00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RSO67_27615
00071 Fatty acid degradation
RSO67_27615
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RSO67_27615
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSO67_27615
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tard01004
]
RSO67_27615
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tard04147
]
RSO67_27615
Enzymes [BR:
tard01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RSO67_27615
Lipid biosynthesis proteins [BR:
tard01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RSO67_27615
Exosome [BR:
tard04147
]
Exosomal proteins
Exosomal proteins of breast milk
RSO67_27615
Exosomal proteins of breast cancer cells
RSO67_27615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_9
DUF764
Motif
Other DBs
NCBI-ProteinID:
WNV09188
UniProt:
A0AA96P8Q7
LinkDB
All DBs
Position
complement(5734344..5736275)
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AA seq
643 aa
AA seq
DB search
MMDYAGRVKQADTYPKLLRLNAKEHGSEIALREKDFGLWREFTWNDYHARVKDFTLGMVE
LGIARGDVIGIIGDNRPDWVAAEIAAHAVGGMSLGLYRDVLDEEAAYLLNYGEAKIVFAE
DEEQVDKLLTLADRVPALKHIVYSDPRGMRKYDDPRLLEADRLAQMGRDRATREPGLYDQ
LVDATQGEDVAILCTTSGTTSNPKLAMLAAGRVLGHCAVYLSFDPKGPDDEYVSVLPLPW
IMEQVYALGKGLLSRMKVNFVEQADTMMNDFREIAPTFVLFAPRVWEGIAADVRARVMDS
SPLKQSLYEIGMKSGLSALAQGKRSAVADTLLFRALRDRLGFTRLRSAATGGAALGPDTF
KFFRAMGVPLRTLYGQTETLGAFTLHPPDAVDPDTTGIAMGSGIEIEVRDPDVQGVGEIV
VRHPNMFLGYYKSPEASAADLRDGWMHSGDAGYFNGNKQLVVIDRIKDLAQTARGERFSP
QYIENKLKFSPYIAETVVLGDNRDALAAMICIRFSIISKWAEKNRISFTTYTDLSSRPEV
YEMIRKEVETVNATLPPAQRIAKFLLLYKELDADDGELTRTRKVRRSVINEKYADIIDGI
YGGARDIPVDTTIRFQDGTSQRIRTRLVVVDMARDGARMEAAE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatggactatgccggacgcgtcaaacaggcagatacctatccgaagctgctgcgcctc
aatgccaaagaacatggcagcgagatcgcgctgcgcgagaaggatttcggcctgtggcgg
gagttcacctggaacgattaccatgcccgggtgaaggatttcacgctcggcatggtcgag
ctcggcatcgcccgtggtgatgtcatcggcattatcggcgacaaccggccggactgggtc
gctgccgagatcgccgcgcatgccgtcggtggcatgagcctcggtctctatcgcgacgtg
ctcgatgaggaagccgcctatctcctgaactatggcgaagcgaagatcgtattcgccgag
gatgaagaacaagtcgacaagctgctcaccctcgccgaccgcgtccccgccttgaagcac
atcgtctacagcgacccgcgcgggatgcggaaatatgacgacccgcgcctgttggaggcc
gacaggctcgcccagatgggccgcgaccgcgccacacgcgaacccgggctctacgatcaa
ctggtcgatgcgacgcagggcgaggacgtcgcgatcctctgtaccacgtcgggcaccacg
tcgaatcccaagctggcgatgctcgcggcaggccgcgtgctcggccactgcgcagtgtat
ctgtcgttcgatccgaagggaccggatgacgaatatgtttcggtgctgccgctgccctgg
atcatggaacaggtctatgcgctcggcaaaggcctcctgagccggatgaaggtcaacttc
gtcgagcaggccgataccatgatgaacgacttccgcgagatcgcaccgaccttcgtgctg
ttcgcgccgcgggtctgggaaggcatcgcggccgatgtgcgtgcccgggtgatggattcg
tcgccgttgaagcagagcctgtatgagatcggcatgaagtcgggcctttccgcactcgcg
caaggcaagcgctcggccgttgccgatacgctgctgttccgtgccctgcgtgatcgtctc
ggcttcacacggctgcgctcggccgccaccggcggcgcggcactgggccccgatacattc
aaattcttccgcgccatgggtgtgccgctgcgcacgctctatggccagaccgaaacactc
ggcgccttcaccctgcatccgccggacgccgtcgatcccgacaccaccggcattgccatg
ggcagcggcatcgaaatcgaagtccgcgatcccgatgtgcagggcgttggcgagatcgtg
gtgaggcaccccaatatgttcctcggctattacaaatcgcccgaggcctccgccgccgac
ctgcgcgacggctggatgcattccggcgacgccggctacttcaacggcaacaagcaactc
gtcgtcatcgaccgcatcaaggatctggcgcagaccgcgcgcggtgaacgcttctcgccg
caatatatcgagaacaagttgaaattctcgccctatatcgccgagacggtggtgctcggc
gacaaccgcgatgcgctcgcggcgatgatctgcatccgcttctcgatcatctcgaaatgg
gccgagaagaaccgcatctcgtttacgacctatacggacctgtcgtcgcgcccggaggtc
tatgagatgatccgcaaggaagtcgagacggtcaatgccacgctgccgcccgcgcagcgc
atcgccaaattcctgctgctctacaaggagctcgacgccgacgacggcgagttgacccgc
acccgcaaagtccgccgcagcgtcatcaacgagaaatacgccgatatcatcgacggcatc
tatggcggcgcgcgggatatccccgtcgacacaacgatccgcttccaggacggcacgtcg
caacgcatccggacgcgattggtcgtggtggacatggcgcgggatggcgcgcgcatggag
gcggcggaatga
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