Tardiphaga sp. 709: RSO67_27830
Help
Entry
RSO67_27830 CDS
T10683
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
tard Tardiphaga sp. 709
Pathway
tard02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tard00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RSO67_27830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tard02000
]
RSO67_27830
02044 Secretion system [BR:
tard02044
]
RSO67_27830
Transporters [BR:
tard02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
RSO67_27830
Secretion system [BR:
tard02044
]
Type I secretion system
Adhesin protein transporter
RSO67_27830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
Peptidase_C39
Motif
Other DBs
NCBI-ProteinID:
WNV09230
LinkDB
All DBs
Position
5790614..5792800
Genome browser
AA seq
728 aa
AA seq
DB search
MDLPAAPVAEVEHQHADPLTDSLLYLAAHHGRAVSRSALLAGLPVERGVLTTALYERAAQ
RAGLEAELNERPLKDIPALVLPAVLLFHDGSTRILRGIDLASGRLTLATPVGDGAIAMER
IEAVEEKYAGFVYFVRPASVSDPRAIAAGDLPKAHWFWSVVSRFGSNYSHVAIAAFIVNM
LALAAPLFTMSVYDRVIPNGAIPSLVALGIGLSLAIAFDFLLKVVRSRIIDMTGKKIDVV
LASNIFEHVMALKMDKRPPSVGILANQMRDFDSVREFFTSGTVVSATDMIFAIIFIAVLF
VIAGPLAWIPLAMLPVMILVGLLIQRPLDRAMKRLQAESAARHGILIESLNGIETVRAVA
GESRVQTVWERSVAATARSSEGVQFWSSLAMTSASVATQLCSLLLVVVGVFLILDGKLSV
GALVAANMLSGRILGPIAGIAAVMTRATQTMSALRSIDRLMATERERPPEKIFVAREITK
GSIEFRNVSFSYPDSPAKALEGISFHVKPGEKIGIIGRVGSGKTTVGRLATAFYPPSEGS
ILIDGIDIRQYDPADLRAGIGFVLQDTDLFYGKLRDNITLGRPDATDEEVLAAARLSGVE
TFIAGHPQGYDMMVAEGGRSLSGGQKQAIGLARVLIRKPRVLFLDEPTAHFDVRSEGEFL
DRLKTLAKGEMSIIVSTHRPSLLSLVDRILVFDNGKIVADGPADQILTRLRPQPQAPQAA
GRPVNVAV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggacctgccggctgcgcccgtagcggaggtcgagcatcagcatgccgatccgttaacg
gacagcctgctttatctcgccgctcaccacggcagagctgtcagccgcagtgcgctgctt
gccggtctcccggtcgagcgcggcgtgctgacaacggctctgtatgagcgcgcggcgcag
cgggcgggcctcgaggccgaactgaacgagcgaccgctcaaggatatccctgcgctggtc
ctgcctgctgtgcttctgtttcacgatggttcgacgcggattctgcgcggcatcgatctg
gcgagtggccgtctgacactggcaacccccgtcggtgacggtgcgatcgccatggagcgg
atcgaagccgtcgaagagaaatatgccggcttcgtctatttcgtccgtccggcgtccgtc
agcgatccgcgcgcgatcgccgccggcgatctgccgaaggcgcactggttctggtctgtc
gtcagccggttcggctcgaactacagccatgtcgccattgcagctttcatcgtgaacatg
ctggcgctcgccgcgccgctgttcaccatgagcgtgtatgaccgcgtcatcccgaatggc
gcaatcccgtcgctggtcgcgcttggtatcggcctgtcgctggcgatcgctttcgatttc
ctgctcaaggtggtccgcagccgcatcatcgacatgaccggcaagaagatcgacgtggtg
ctggcgtcgaacatctttgaacatgtgatggcgctgaagatggacaagcgtccgccctcg
gtcggcattctcgccaatcagatgcgcgacttcgactcggtccgcgaattcttcacgtca
ggcacggttgtgtcggcgaccgatatgatattcgcgatcatcttcatcgcagtgctgttc
gtgattgccggcccgctggcctggatcccgctcgcgatgctgcctgtgatgatcctcgtc
ggtctcttgatccagcggccgctcgatcgtgcgatgaagcgcctgcaggcagagtcggct
gcgcgtcacggcattctcatcgagtcgctgaatggcatcgagaccgttcgcgcagttgct
ggcgagagccgggtccagacagtgtgggaacgttccgtcgcagcgacggcacgttccagc
gaaggcgtgcagttctggtcctcgctggcgatgaccagtgcgagcgtggcgacgcagctc
tgcagcctgttgctggtcgtggtcggtgtgttcctcatcctcgacggcaaactgtcggtc
ggtgcgctggttgcggccaatatgttgtcgggccgcattctcggtcccatcgccggcatc
gcggccgtgatgacgcgcgcgacacagaccatgtcggccctgcggtcaatcgatcgcctg
atggcgacggagcgcgagcggccgccggaaaagatcttcgtggcccgcgagatcacgaag
ggcagcatcgaattccgcaatgtcagcttttcctatccggacagcccggcgaaagccctc
gagggcatctctttccacgtgaagcctggcgagaagatcggcatcatcggccgagtcggc
tcaggcaagaccacggtcggccgtctggcgacggcgttctatccgccgagcgaaggcagc
atcctgatcgatggcatcgatatccggcaatacgacccggcggacctgcgcgccggcatc
ggttttgtgctgcaggataccgatctgttctatggcaagctgcgcgacaacatcacgctg
ggccgtcccgatgcgaccgatgaggaagtgctcgcggctgcacggctgtccggcgtcgag
accttcatcgccggtcatccgcagggctacgacatgatggttgccgaaggcggccgtagc
ctgtcgggcggccagaaacaggcgatcggcctcgcgcgtgtgctgatccgcaagccgcgc
gtgttgtttctcgacgaacccactgcgcatttcgacgtgcgcagtgaaggtgaattcctc
gatcgccttaagacgctcgccaagggtgagatgtccattatcgtctcgacgcatcgcccg
tcgctcctgtcgctagtcgatcgcattctcgtgttcgacaacggcaagatcgtcgccgac
ggccccgccgatcagatcctgacgcgcttgcgcccgcagccgcaggctcctcaagccgcg
gggaggccggtcaatgtcgcagtctga
DBGET
integrated database retrieval system
