Tardiphaga sp. vice154: FIU28_00015
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Entry
FIU28_00015 CDS
T11090
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FIU28_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tarv03400
]
FIU28_00015 (recF)
DNA repair and recombination proteins [BR:
tarv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FIU28_00015 (recF)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_15
AAA_23
AAA_27
ABC_tran
AAA_29
AAA_30
T2SSE
SbcC_Walker_B
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QDM19706
LinkDB
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Position
3101..4240
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AA seq
379 aa
AA seq
DB search
MTASRIHRLTLTHFRNYRAASLNTRGDMVVLVGPNGAGKTNCLEAISFLSPGRGLRRATL
DDVADLQGDGSWAVSAEVEGEVGLATLGTGIDPPANEAAASSRRCRIDREPVSSATAFGD
HLRMVWLTPAMDQLFMGAASERRRFFDRLVLAIDKDHSSRVSALDRSLRSRNRLLEERNY
DGHWLDAIERETAELAVAVAAMRGQTVTRLAAMLRAREEASVFPSARIMLDGWMENALVN
EPATAVEDRYRQILRDGRPRDAAAGRTLDGPHLTDLQVIYAPKNMPARDASTGEQKALLI
GLILAHATLVADMTGITPLLLLDEVVAHLDPDRRRALFGELSKLGAQVWMTGADPAAFAE
IGPTGELFDVADGRVSKRG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctcccgcatccatcgcctgacgctcacccacttccgcaactatcgcgcggcg
tcgctcaacacgcgcggcgacatggtggtgctggtcgggccgaacggcgccggcaagacc
aattgcctggaggcgatctcctttctgtcgccgggccgcgggctgcgccgcgccacgctc
gacgacgtcgccgatttgcagggcgacggctcctgggcggtttctgcggaagtcgagggc
gaagtcggcttggccacgctgggcaccggcatcgatccgcccgccaatgaggccgccgcg
tcgagccggcgctgccgcatcgaccgcgagccggtcagttcggcgaccgcgttcggcgat
catttgcgcatggtctggctgacgccggcgatggaccagctgttcatgggcgcggcctcc
gagcggcggcggttcttcgatcgcctggtactggcgatcgacaaggaccattccagccgc
gtctcggcgctggatcggagcctgcgctcgcgcaaccgcctgctcgaggaacgcaactat
gacggccactggctcgacgcgatcgagcgcgagaccgccgaactcgccgtcgccgtcgcc
gcgatgcgcggccagaccgtgacgcggctggccgcgatgctgcgcgcgcgcgaagaagcc
tcggtgtttccctcggcgcgaatcatgctggacggctggatggagaacgcgctggtgaat
gagcccgccaccgccgtggaagaccgttaccgccagattttgcgcgacggccgtccgcgt
gacgccgccgccggccgcacgcttgacggcccgcacctcaccgacctgcaggtgatctac
gcgccgaagaacatgccggcgcgcgatgcctccaccggcgagcagaaggcgctgctgatc
gggctgatcctggcgcatgccacgctggtcgccgacatgaccggcatcacgccgctattg
ttgctcgatgaagtcgtggcgcatctcgatcccgaccgccgccgcgcgctgtttggcgag
ttgtcgaagctcggcgcgcaggtctggatgaccggcgccgatcccgcggccttcgccgaa
atcggcccgaccggcgagttgttcgacgtcgccgacgggcgcgtcagcaagcggggataa
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