Tardiphaga sp. vice154: FIU28_00670
Help
Entry
FIU28_00670 CDS
T11090
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIU28_00670 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tarv03019
]
FIU28_00670 (pnp)
03016 Transfer RNA biogenesis [BR:
tarv03016
]
FIU28_00670 (pnp)
Enzymes [BR:
tarv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FIU28_00670 (pnp)
Messenger RNA biogenesis [BR:
tarv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FIU28_00670 (pnp)
Transfer RNA biogenesis [BR:
tarv03016
]
Prokaryotic type
tRNA degradation factors
FIU28_00670 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QDM19827
LinkDB
All DBs
Position
158167..160314
Genome browser
AA seq
715 aa
AA seq
DB search
MFNIHTVEIDWGGRPLKLETGKVARQADGAVIATYGETVVIATVVAAKTAKDGIDFLPLT
VDYIEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVVVTVLSH
DMENDPDILALIATSAALTISGAPFQGPIGAARVGFINDEFVLNPTLDEMADTQLDLVVA
GTQDAVLMVESEAKELNEDVMLGAVMFGHRHFQPVIKAIIELAEKAAKEPREVVTIDDSA
LEKEMLGMVETELRSAYSLPIKQERYAAVGAVKKKAMAHYFPEGEEPKYDKLRIAGVFKE
LESKIVRWNILDTKKRIDGRDLTTVRPIVCEVGVLPRAHGSALFTRGETQALVVTTLGTG
EDEQYIDSLSGTYKETFLLHYNFPPYSVGETGRMGGTKRREIGHGKLAWRAVHPVLPGHH
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTDAGITSLQMDIKIAGITEEIMKVALGQAKEGRIHILGEMSK
ALNNARAELGEYAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIDDDGTVKVAS
SDGESIKAAIKWIKSIASDPELNAIYDGTVVKVMEFGAFVNFFGAKDGLVHISQLASGRV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEAKQKAEEGTAAAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatattcataccgtcgaaatcgattggggcggtcgtccgctcaagctcgaaacc
ggcaaggtcgcccgtcaagccgacggcgccgtcatcgccacctatggcgagaccgtcgtc
atcgccaccgtggtcgccgccaagaccgccaaggatggcatcgacttcctgcccttgacc
gtcgactacatcgagaagacctacgccgccggccgcatcccgggtggctacttcaagcgc
gaaggccgtccgaccgagaaggagaccctggtctcccgcctgatcgaccgtccgatccgc
ccgctgttcgtcgacggctggcgcaacgagacccaggtcgtcgtcaccgtgctgtcgcac
gacatggaaaacgatccggacatcctggcgctgatcgccacctcggctgccctgacgatt
tccggcgccccgttccagggcccgatcggtgcggcccgcgtcggcttcatcaacgatgaa
ttcgtgctcaacccgacgctcgacgaaatggccgacacccagctcgacctggtcgtcgcc
ggcacccaggacgccgtcctgatggtcgaatcggaagccaaggaactcaacgaagacgtc
atgctcggcgccgtgatgttcggtcaccgccacttccagccggttatcaaggcgatcatc
gagctcgccgagaaggccgccaaggagccgcgcgaagtcgtcaccatcgacgacagcgcg
ctcgaaaaggaaatgctcggcatggtcgagaccgagctgcgctcggcctactcgctgccg
atcaagcaggagcgttacgctgccgtcggcgccgtcaagaagaaggcgatggcgcactac
ttcccggaaggcgaagagcccaaatacgacaagctgcgcattgccggcgtgttcaaggaa
ctggaatcgaagatcgttcgctggaacatcctcgacaccaagaagcgcatcgacggccgc
gacctgaccacggtccgtccgatcgtctgcgaagtcggcgtgctgccgcgtgcgcacggt
tcggcgctgttcacccgcggtgaaacgcaggctctcgtcgtcaccaccctcggcaccggc
gaagacgagcagtacatcgactcgctgtcgggcacgtacaaagagacgttcctgctgcac
tacaactttcctccctactcggtcggcgaaaccggccgcatgggcggcaccaagcgtcgc
gaaatcggccacggcaagcttgcctggcgcgcggtgcatccggtgctgccgggtcatcac
gaattcccctacaccatccgcgtggtgtcggagatcaccgagtcgaacggctcgtcctcg
atggcttcggtctgcggcgcgtctctcgcgctgatggatgcgggcgtccccctgaagcgg
ccgaccgcgggtatcgcgatgggcctcattctcgagggcgagcgctttgcggtcctgtcg
gacatcctgggtgatgaagatcatctcggcgacatggacttcaaggtcgccggcaccgac
gccggcatcacctcgctgcagatggacatcaagatcgccggcatcaccgaagagatcatg
aaggtcgcgctcggccaggccaaggaaggccgcattcacattctcggtgagatgtcgaag
gcgctcaacaatgcccgtgccgagctcggcgaatacgcgccgcgcatcgagacgttcaag
atcccgaccgacaagatccgtgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtggaaaagaccggcgccaaggtgaacatcgacgatgacggcaccgtcaaggtggcgtcc
tccgatggcgagtcgatcaaggccgcgatcaagtggatcaagtcgatcgcaagcgacccg
gaactcaacgcgatctatgacggcaccgtcgtcaaggtcatggagttcggtgcgttcgtg
aacttcttcggcgccaaggacggcctggttcacatcagccagctcgcgtccggccgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgatcgcggcaagacccgcctgtcgatgaaggtcgtcgaccagaccaccggcgaagac
ctcgaagccaagcagaaggccgaagaaggcaccgctgcggcagagtaa
DBGET
integrated database retrieval system
