Tardiphaga sp. vice154: FIU28_00845
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Entry
FIU28_00845 CDS
T11090
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
tarv Tardiphaga sp. vice154
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tarv03032
]
FIU28_00845
03036 Chromosome and associated proteins [BR:
tarv03036
]
FIU28_00845
03400 DNA repair and recombination proteins [BR:
tarv03400
]
FIU28_00845
DNA replication proteins [BR:
tarv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FIU28_00845
Chromosome and associated proteins [BR:
tarv03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FIU28_00845
DNA repair and recombination proteins [BR:
tarv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FIU28_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
QDM19858
LinkDB
All DBs
Position
complement(201073..201378)
Genome browser
AA seq
101 aa
AA seq
DB search
MIKSELVQRIAEHNPHLYQRDVENIVNAILDEIVAALARGDRVELRGFGAFSVKHRPARA
GRNPRTGAHVPVDQKSVPFFKTGKEMRERLNKDSGTSEASA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatccgaactcgtccagcgcatcgccgagcacaatccgcatttgtaccagcgg
gatgtggagaacatcgtcaatgcgatcctcgatgagatcgtggcggcgctggcgcgcggc
gaccgggtcgaattgcggggcttcggggcgttttcggtgaagcaccgtccggcccgcgcc
ggccgtaacccgcgtaccggcgcgcatgtgccggtcgaccagaagagcgtgccgtttttc
aagaccggcaaggaaatgcgcgagcggctgaacaaggactccgggacttccgaagccagc
gcgtga
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