Tardiphaga sp. vice154: FIU28_01055
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Entry
FIU28_01055 CDS
T11090
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU28_01055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tarv02000
]
FIU28_01055
Transporters [BR:
tarv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FIU28_01055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QDM19895
LinkDB
All DBs
Position
complement(241388..242698)
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AA seq
436 aa
AA seq
DB search
MTASDIPKTHGQPDQAFEGNRLTGLTLYDALTAWDYETGTSIMPMLATEWAVDATDKTKS
LFKLRPGITFKDGSAFNADAVVWNVRKVLDKASPHYDPSQVGWTAPRMPTLRSARKVDDM
TVEFTTSEPDSFLAINLVNLFMASPTQWQAKFDRVAGEITDPAQRAATAWREFNADPSGT
GAFHLAKLVPRGRLELVRNDKYWDSKRVAKIDRLVMVPVPEVNARTAALLTGQVDLIEAP
APDAVASIRARGFKIATSQSSHVWPWQPSMLDGSPWQGKRVREAANLCSDRNDLVVLNGG
LADPAFGMMRPNHPWFGKPGLKLRFDGDEGRKLMKAAGYSEQKRATVKILTTTVGSAMMQ
PLPMNETLQQALAKCYFDAEARDAALAKVHERLVDESMFIYMVHEVAPRALSPRIKDFSA
PNGFYVDWSRIDMASD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacggccagcgacattccgaagacccacggccagcccgaccaggccttcgaaggcaac
cgcctcaccgggttgacgctgtatgatgcgctgaccgcctgggactacgagaccggcacg
agcatcatgccgatgctcgccaccgaatgggcggtggatgcgaccgacaaaaccaaatcg
ctgttcaagctgcgccccggcatcaccttcaaggacggctcggcgttcaacgccgacgcc
gtggtatggaacgtgcgcaaggtgctcgacaaggcatcgccgcactacgatccgagccag
gtgggctggactgcgccgcgcatgccgacgctgcgctcggcgcgcaaggtcgacgacatg
acggtggagttcacgacctcggagccggattcgtttctggcaatcaacctcgtcaatctg
ttcatggcgtcgccgacacagtggcaggcgaagttcgacagggtggccggcgaaatcacc
gatcccgcgcagcgcgcggccacggcctggcgcgagttcaacgccgacccgtcgggtacc
ggcgccttccatctggcgaaactggtgccgcgcgggcggctcgaactggtgcgcaacgac
aaatactgggacagcaagcgcgtcgcgaaaatcgaccgtctggtgatggtcccggttccg
gaagtcaacgcgcgcaccgccgcgttgctcaccgggcaggttgacctcatcgaggcgccg
gcgccggacgcggtggcctcgatccgcgcccgcggcttcaagattgcgaccagccagagt
tcgcatgtctggccgtggcagccgtcgatgctggacggctcgccgtggcagggcaagcgc
gtccgcgaggccgccaatctgtgctccgaccgcaacgacctcgtggtgctgaatggcggc
ctcgccgatcccgccttcggcatgatgcggccgaaccacccctggttcggcaagcctggc
cttaagctgcgcttcgacggcgacgaaggccgcaagcttatgaaggcggccggctattcc
gagcagaagcgcgccacggtgaagatcctgaccaccacggtcggctctgcgatgatgcag
ccgctgccgatgaacgagacgctgcagcaggcattggctaagtgctacttcgatgccgaa
gcccgcgacgcggcacttgccaaggtgcatgagcggctggtcgacgaatcgatgttcatc
tacatggtccacgaagtcgccccgcgggcgctgtcgccgcgcatcaaggatttctcggcg
ccgaacggcttctacgtcgactggtcgcggatcgacatggcgtcggactag
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