Tardiphaga sp. vice154: FIU28_02015
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Entry
FIU28_02015 CDS
T11090
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv00300
Lysine biosynthesis
tarv00470
D-Amino acid metabolism
tarv01100
Metabolic pathways
tarv01110
Biosynthesis of secondary metabolites
tarv01120
Microbial metabolism in diverse environments
tarv01230
Biosynthesis of amino acids
Module
tarv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FIU28_02015
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FIU28_02015
Enzymes [BR:
tarv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FIU28_02015
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GFIT
Motif
Pfam:
DAP_epimerase
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
QDM20061
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Position
complement(445148..446014)
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AA seq
288 aa
AA seq
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MSALANHSFAKMNGIGNEIVVIDLRDGAAGIAPDDARTVAAIVPYDQLMVLQRPGLAGTE
AFVRIYNNDGSEAGACGNGMRCVAQRVFAGSGKDALTFETRAGLINCWPGPSPDTFTVDM
GAPKFGWQDIPLAEEFRDTRGIELQIGPIDAPVLHTPSVVSMGNPHAIFWVDDIEAYDLS
RFGPLLENHPIFPERANITLAHVVDRDHIVMRTWERGVGLTRACGSAACATAVAAARLRR
TGRLVHMTLPGGKLTIDWRERDDHVLMTGPAELEYEGRLDPKLFGAAV
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggctaaccacagctttgccaagatgaacggtatcggcaacgagatcgtc
gtcatcgacctgcgcgacggcgccgccggcatcgcgccggacgacgcccgcacggtcgca
gccatcgtgccctatgaccagttgatggtgctgcagagaccgggcctggccggcaccgag
gccttcgtccggatctacaacaatgacggctcggaagcgggcgcctgcggcaatggcatg
cgctgcgtggcgcagcgggtgtttgccggcagcggcaaggatgcgctgaccttcgagacc
cgcgccgggctgatcaattgctggcccggcccgtcgccggacaccttcaccgtggacatg
ggcgcgccgaaattcggctggcaggatatcccgctggcggaggagtttcgcgacacccgc
ggcatcgagctgcagatcggcccgatcgacgcgccggtcttgcacacgccctcggtggtc
tcgatgggcaatccgcatgcaatcttctgggtcgacgacatcgaggcctatgatctcagc
cgcttcgggccgctgctggagaaccacccgatcttcccggagcgcgccaacatcacgctg
gcccatgtcgtggaccgcgatcatatcgttatgcgaacctgggaacgcggcgtcggcctg
acccgcgcctgcggctccgccgcctgcgccaccgcggtcgccgccgcccgcctgcgccgc
acgggccgcctcgtccacatgacgctgcccggcggaaagctcaccatcgactggcgcgaa
cgcgacgaccatgtgctgatgaccgggcctgccgagctggaatatgagggccggctcgat
ccgaagctgttcggagcggcggtttaa
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