Tardiphaga sp. vice154: FIU28_05940
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Entry
FIU28_05940 CDS
T11090
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv00900
Terpenoid backbone biosynthesis
tarv01100
Metabolic pathways
tarv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
FIU28_05940
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tarv01006
]
FIU28_05940
Enzymes [BR:
tarv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
FIU28_05940
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
FIU28_05940
2.5.1.29 geranylgeranyl diphosphate synthase
FIU28_05940
Prenyltransferases [BR:
tarv01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
FIU28_05940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QDM20720
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All DBs
Position
1268156..1269022
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AA seq
288 aa
AA seq
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MDVASRIEQALNTAIARSEVAECPPRLAAAMRYAVFPKGARIRPRLCHSVAAACGEDNAA
ATDAAGAALELLHCASLVHDDLPCFDAADTRRGRPSVHKAFGEPLAVLAGDALIVLAFQT
LARIPCAPERLATLTLTIANSVGVPSGIVAGQAWECESQIDLAHYHRAKTGALFAAASVA
GAAAAGVDAEPWRMLGEKLGEAYQVADDIRDAAADEDEIGKPVGQDLVHGRPSAVLSYGL
DGAVQHLHQLVRDAIGAMPPCVNGAELRALMLSEVRRLVPAKLAQFAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgccagccggatcgaacaagccctcaacaccgcgattgccagaagcgaggtg
gccgaatgcccgccgcggctggcggcggccatgcgctatgcggtgtttcccaagggcgcg
cggatccggccccggctatgccacagcgtggcggccgcctgcggcgaagacaatgccgcg
gcgaccgatgccgcaggcgccgcactggagctgctgcattgcgcctcgctggtgcatgac
gacctgccatgtttcgacgcggccgataccaggcgcgggcggccctcggtgcacaaggcg
tttggcgagccgctcgccgtgctggccggcgacgcgctgatcgtgctggcgttccagacg
ctggctcggattccctgcgcgccggagcggctggcgacgctcaccctcaccatcgccaat
tcggtcggcgtgccctcgggcatcgtggccggacaggcatgggagtgcgaatcgcagatc
gatctggcgcattatcaccgcgccaagaccggcgcgctgtttgccgccgcctccgtggcg
ggcgccgccgcggcgggcgtggatgcggagccgtggcgtatgctcggtgaaaagctcggc
gaggcctatcaggtcgccgacgacattcgcgacgccgctgccgacgaggacgagatcggc
aagccggtcgggcaggacctcgtgcacgggcggccgagcgccgtgctgtcctacggactc
gatggcgccgtgcagcatttgcatcaactggtgcgcgatgcgatcggcgcgatgccgccc
tgcgtcaacggcgcggaattgcgcgcgctgatgctgtcggaagtgcgccgcctggtgccg
gccaagctcgcgcaattcgcggcttaa
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