Tardiphaga sp. vice154: FIU28_06640
Help
Entry
FIU28_06640 CDS
T11090
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv03420
Nucleotide excision repair
tarv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIU28_06640
03430 Mismatch repair
FIU28_06640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tarv03400
]
FIU28_06640
Enzymes [BR:
tarv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIU28_06640
DNA repair and recombination proteins [BR:
tarv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIU28_06640
MMR (mismatch excision repair)
Other MMR factors
FIU28_06640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QDM20841
LinkDB
All DBs
Position
complement(1420212..1422287)
Genome browser
AA seq
691 aa
AA seq
DB search
MPAPATYLDTLNPEQRRAVEHGVLSRHAAPAGPLLVIAGAGSGKTNTLAHRVAHLIVNGA
DPRRILLMTFSRRAASEMSRRVERIARKVMGTNAGVMTDALHWAGTFHGIGARLLRDYAK
QIGLDPAFTIHDREDAADQMNLVRHELGFSKTEARFPTKGTCLAIYSRCVNAEAGLEEVL
GANYPWCAGWAAELRELFAAYVAAKQKQNVLDYDDLLLYWAQTMTEPLLAADIGDRFDHV
MVDEYQDTNRLQSSILLALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPGQFSPAADI
ITLDRNYRSTQPILAAANGVIDLARERFTKNLWTDRASGIKPQLVAIRDETDQARCLVER
VLDLRESGTRLKEQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDAAHIKDVLALLR
FVENPRDRVAGFRLMQLMPGVGPASAQRALDHMAAAADPIGALLDAPAPKRAGDDWRGFV
EVVTELRAGRAGWPAELELARTWYEPHLDRIHEDGMTRRADLIQLEQIASGYPSRERFLT
ELTLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWKSVYVLNVVDGCMPSDLGTGTSA
ELEEERRLLYVAMTRAKDELHLMVPQRFFTHGQNAQGDRHVYASRTRFIPDRLLHLFERT
SWPMASAETASRAATQGVRFDVGARMRGMWR
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgcacccgccacctatctcgacaccctgaatccggaacagcgccgcgctgtggaa
catggcgtgctgtcgcgccatgctgcgccggccggcccgctgctggtgatcgccggggct
ggctccggcaagaccaatacgttggcgcaccgcgtcgcgcatctcatcgtcaacggcgcc
gatccgcgccgcatcctgctgatgacgttttcgcgccgcgcggcgtccgagatgagccgc
cgcgtcgaacgcatcgcgcgaaaggtgatggggacaaacgccggcgtgatgaccgatgcg
ctgcactgggccggcaccttccatggcatcggcgcgcgcctcttgcgcgactatgccaaa
cagatcgggctcgatcccgctttcacaatccacgaccgcgaggacgccgccgaccagatg
aatctggtgcgccacgaactcggtttctcgaagaccgaggcccggtttccgaccaagggc
acatgcctcgcgatctattcgcgctgcgtcaacgccgaggccggcctcgaagaggtgctg
ggcgcgaactatccatggtgcgccggctgggccgccgagctgcgcgaactgttcgcggct
tacgtcgccgccaagcagaaacagaacgtgctcgattacgacgacctgcttttgtactgg
gcgcagacgatgaccgagccgttgcttgccgccgatatcggcgaccgcttcgaccatgtc
atggtcgacgaatatcaggacaccaaccgcctgcaatcctcgatcctgctggcgctgaag
cccggcggacgcggcctcaccgtggtcggcgacgacgcgcagtcgatctattcgtttcgc
gccgccaccgtgcgcaacatcctggattttcccgggcagttctcgccggcagccgacatc
atcacgctggaccgcaactatcgctcaacgcagccgatcctcgccgccgccaacggcgtg
atcgatctggcgcgcgaacgcttcaccaagaacctgtggaccgaccgcgcctccggcata
aagccgcagctggttgccatccgggacgaaaccgatcaggcgcgctgcctggtcgagcgc
gttctggatctccgggaaagcggcacgcggctcaaggagcaagccgttctgtttcgcacc
tcgtcgcactccgggccgctggaagtggaattgacccggcgcaacattccgttcgtgaaa
ttcggcggactgaaatttctcgatgccgcgcacatcaaggatgtgctggcgctgctgcgc
ttcgtcgaaaacccgcgcgaccgcgtcgccggcttccggctgatgcagctgatgcccggc
gtgggacctgcctcggcgcagcgcgcgctcgatcacatggcggcggcggccgatccgatc
ggcgcgttgctggatgcgcccgcgccgaaacgcgccggcgacgactggcgcggattcgtc
gaggtggtgaccgaactgcgcgccggacgcgccggctggccggcggagctggagctagcg
cggacatggtacgagccgcatctcgaccgcatccatgaagacggcatgacgcgccgcgcc
gacctgatccagctcgaacagatcgcctcgggctatccgtcgcgcgagcgctttctcacc
gagctgacgctggacccgccggacgctaccagcgaccaggccggcgttccgctgctcgac
gaggactatctgatcctgtcgaccatccattccgccaagggtcaggagtggaagtcggtc
tatgtgctgaatgtcgtcgatggctgcatgccgtccgatctgggcaccggcacctccgcc
gaactggaagaggaacgccgccttctctatgtcgcgatgacgcgcgccaaggacgagctg
catctgatggtgccgcagcgcttcttcacccacggccagaatgcccagggcgaccgccac
gtctacgcgtcgcgcacgcgcttcatcccggaccggctgctgcacctgttcgagcgtacg
agctggccgatggcgagtgccgagacggcctcgcgcgccgcgacgcaaggcgtgcgcttc
gacgtcggcgcacggatgcgcggtatgtggcggtga
DBGET
integrated database retrieval system
