Tardiphaga sp. vice154: FIU28_06920
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Entry
FIU28_06920 CDS
T11090
Name
(GenBank) peptide ABC transporter
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU28_06920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tarv02000
]
FIU28_06920
Transporters [BR:
tarv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FIU28_06920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SHIRT
DUF7625
Motif
Other DBs
NCBI-ProteinID:
QDM20889
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Position
1492786..1494339
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AA seq
517 aa
AA seq
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MRTIDLGNATLRRRDILALMGGAAATGALGLPALAQDAKKGGVLKVAAPANPSSLDPATG
GAGSDHSILWTMYDTLVIWDYETLKPKPGMAKWSFPDPKIMVLDITAGIKFHDGTPLDAE
AVKFNLDRSRTDQRSNIKPDVSSIEAVEVTGPLQVTLKLKNPDTALPAILSDRAGMMVSP
TNIKALGNDTDRKPVGAGPWKFVRWNDNEIIVVTRHEDYWQKGRPYLDGIEFNIIPENAT
ALRSVVAGQNDMAFQLPARLKPVIERAKSLSVVSSPTLYCIQLYLNYGRSPLDNLKVRQA
INFALDRDAFVKATLSGLGEPARMTLPSSHWAFNKDVAGTYPHNPDKARELLAEAGYKDG
LELTIGGYMDQDSVRRGEVIQDQLGKAGIRLKFTRGTIAEISAQFFATEKKFDLLVSAWT
GRPDPSMTYGLSFDKGAYYNAGRTGDPELSKLIQESRISEDLAKRAEVFAKIQRFTVENA
LSAPLAFQFELDALSAKVKGFSPNLLGKPKFENISLG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacgatcgacctcgggaacgcgacgttgcgtcgccgcgatattctcgcgctgatg
ggcggcgccgcggcgactggcgcgcttggattgccggcgctggcgcaggacgccaagaag
ggcggcgtgttgaaggtcgcagcgcccgccaatccgtcctcgctcgatccggcgaccggc
ggcgccggttcggatcacagcatcctgtggacgatgtatgacacgctggtcatctgggat
tacgagacgctgaagccgaagcccggcatggcgaagtggtcgtttcccgatccgaagatc
atggtgctcgacatcacggccggcatcaaatttcacgatggaaccccgctcgatgccgag
gcggtcaagttcaacctcgaccgtagccgcaccgaccagcgttcaaatatcaagcccgac
gtgtccagcatcgaagcggtcgaggtgaccggcccgctgcaggtcaccctgaagctgaag
aacccggataccgcgctgcccgcgatcctcagcgatcgtgcgggcatgatggtgtcgccg
accaacatcaaggcgctcggcaacgacaccgatcgcaagccggtgggcgcgggcccgtgg
aaattcgttcgttggaacgacaacgaaatcatcgtggtgacacgtcacgaggattactgg
cagaagggccggccctatctcgatggcatcgagttcaacatcattcccgagaacgccacg
gcgttgcgctccgtggtggccgggcagaacgatatggcgttccagttgccggcgcggctg
aagccggtgatcgaacgcgcaaagagcctttccgtcgtaagttcaccgacgctgtactgc
atccagctctacctcaactatggccgttcgccgctcgacaatctcaaggtccgccaggcg
atcaatttcgcgcttgaccgcgatgccttcgtcaaggcgaccttgagcggactgggcgag
cccgcccgcatgacgctgccgagttcgcactgggccttcaacaaggatgtggcggggacc
tatccgcacaatcccgacaaggcgcgcgaactgctcgccgaggccggatacaaggacggc
ctcgaactgacgatcggcggctacatggatcaggattccgtgcgccgcggcgaggtgatc
caggaccaactcggcaaggccggcatccgtctcaagttcacccgagggacgatcgccgaa
atcagcgcgcagttcttcgctaccgagaagaagttcgacctccttgtgtcggcatggacc
ggtcgtccggacccgagcatgacctacgggttgagcttcgacaaaggcgcatactacaat
gccgggcgcaccggtgacccggagctttcgaaactgatccaagaaagccgcatcagcgag
gatctcgccaaacgcgccgaagtgttcgccaagatccagcgtttcacggttgaaaacgcc
ctgtcggcgccgctcgccttccagttcgagcttgatgccttgtcggccaaggtcaagggc
ttctcgccgaacctgctcggcaagccgaagttcgagaacatctccctcgggtag
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