Tardiphaga sp. vice154: FIU28_07220
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Entry
FIU28_07220 CDS
T11090
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tarv Tardiphaga sp. vice154
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tarv03021
]
FIU28_07220 (rpoH)
Transcription machinery [BR:
tarv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FIU28_07220 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_11
HTH_7
Sigma70_r4_2
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
QDM20927
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Position
1541902..1542801
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AA seq
299 aa
AA seq
DB search
MVHTAAVPILTTERGLTHYLEEIRRFPMLGRQEEYTHAKRWREHDDRDGAHHLVTSHLRL
VAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKCFRLTTYAMWWIKASIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSKISALEEGDMHPDHVKAIATRLGVTEQDVVDMNRRL
GGDASLNAPIRDDGEPGEWQDWLVDHSPNQEAILAEHEEFDHRRNALNGAMGVLNDRERR
IFEARRLSDEPMTLADLAPEFGVSRERVRQIEIRAFEKVQKAVKNRIAAMESLAALPVH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtccacaccgcggccgtgccgatccttacgactgaacgcggcctcacccattatctt
gaggaaatccggcggttcccgatgttggggcgccaggaagaatatacgcacgccaagcgt
tggcgcgagcatgacgatcgcgacggggcgcaccaccttgtcaccagccatctgcgactc
gtggccaagatcgccatgggctatcgcggctatggtctgccgatttccgaagttgtctcc
gagggcaatgtcggcctgatgcaggcggtgaagcggttcgagcccgagaagtgcttccgt
ctcaccacctacgcgatgtggtggatcaaggcgtcgatccaggaatacatcctgcgttcg
tggtcgctcgtgaaaatgggcactaccgcgaaccagaagaagctattcttcaacctgcgc
aaggccaagagcaagatctccgcgcttgaagagggtgatatgcaccccgatcatgtgaag
gccattgcgacccggctcggcgtcaccgagcaggacgttgttgatatgaaccggcgtctc
ggcggcgacgcatcgctcaacgcgccgatccgcgacgacggcgaacccggcgaatggcag
gactggctggtcgatcattcgcccaaccaggaagccatcctcgccgagcacgaggagttc
gatcaccgccgcaacgcgctcaacggcgcaatgggcgtgctcaacgaccgcgagcgccgc
atcttcgaggcgcgacgtctctccgacgagccgatgacgctggcagatctcgcccccgaa
ttcggcgtgtcgcgcgaacgcgtgcggcagatcgagattcgcgcgtttgagaaagtgcag
aaggcggtcaagaaccgcatcgcggcgatggaaagcctagcggcgctgccggtgcattag
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