Tardiphaga sp. vice154: FIU28_09210
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Entry
FIU28_09210 CDS
T11090
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv00730
Thiamine metabolism
tarv01100
Metabolic pathways
tarv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
FIU28_09210 (thiC)
Enzymes [BR:
tarv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
FIU28_09210 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QDM21282
LinkDB
All DBs
Position
complement(1967786..1969714)
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AA seq
642 aa
AA seq
DB search
MNIRSNPDTTRPAVTTGPLPSSRKVYAIPESAPDLRVPIREIILSPGAGEPDLPVYDTSG
PYTDPNVVIDVNAGLPRPRAKWVMERGGVEEYQGRDVKPEDNGNVGAAHAAKSFTAYHKP
MRGVGDAMITQYEFARAGIITKEMIYVAERENLGRKVQLERAEAALADGESFGATLPAFV
TPEFVRSEIARGRAIIPCNINHAELEPMIIGRNFLTKINANIGNSAVTSSVEEEVDKMVW
SIRWGADTVMDLSTGRNIHTTREWILRNAPIPIGTVPIYQALEKCDGDPVKLTWELYRDT
LVEQCEQGVDYFTIHAGVRLPYIHLTANRVTGIVSRGGSIMAKWCLAHHKESFLYTHFEE
ICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTKIAWAKGCQVMIEGPGHV
PLHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP
KEHLGLPNRDDVKVGVITYKIAAHASDLGKGHPAAQLRDDALSRARFDFRWQDQFNLGLD
PETAVAYHDETLPKDAHKVAHFCSMCGPKFCSMKITQDVRDYAATLGDNEKAALNLGGAG
SMGMSISGVIEDGMATMSQKFKDMGEQVYVQAEAVKASNKVL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacgctccaatcccgacaccacccgccccgccgtcaccaccggcccgctgccg
tcgtcgagaaaggtctatgcgatcccggaaagcgcgcccgatttgcgcgtgccgatccgc
gagatcattctgtccccgggcgccggcgagccggacctgccggtctatgacacctccggc
ccctataccgatccgaacgtcgtcatcgacgtcaatgccggcctgccccgcccgcgcgcc
aaatgggtgatggagcgcggcggcgtcgaggaatatcagggccgcgacgtcaagccggaa
gacaacggcaatgtcggcgcagcacatgccgcaaagtccttcaccgcctatcacaagccg
atgcgcggcgtgggcgatgcgatgatcacgcagtatgagttcgcgcgcgcgggcatcatc
accaaggagatgatctacgtcgccgagcgcgagaatctcggccgcaaggtgcagctcgaa
cgcgccgaagccgcattggccgacggcgagagcttcggcgcgacgctgccggctttcgtc
acgccggaattcgtgcgttccgaaatcgcccgcggccgcgccatcatcccctgcaacatc
aaccacgccgaactcgagccgatgatcatcggccgcaacttcctgaccaagatcaacgcc
aatatcggcaactctgccgtgacgtcgtcggtcgaggaggaagtcgacaagatggtgtgg
tcgatccgctggggcgcggacaccgtgatggacctctccaccggccgcaacatccacacc
acgcgtgaatggatcctgcgcaacgcgccgatcccgatcggcaccgtgccgatctaccag
gcgctggagaagtgcgacggcgatccggtgaagctgacctgggagctgtaccgcgacacg
ctggtcgagcagtgcgaacaaggcgtcgactacttcaccatccacgccggcgtgcgcctg
ccctacatccacctcaccgccaaccgcgtcaccggcatcgtgtcgcgcggcggctcgatc
atggcgaagtggtgcctcgcgcatcacaaggagagcttcctctacacgcatttcgaagag
atctgcgacctgatgcgcaaatacgacgtgtcgttctcgctcggcgacggccttcgcccc
ggctcgatcgcggacgccaatgaccgcgcgcagttcgccgagctggagacgctgggcgag
ctcaccaagatcgcatgggccaagggctgccaggtgatgatcgagggccccggccacgtg
ccgctgcacaagatcaagatcaacatggacaagcagctcaaggaatgcggcgaggcgccg
ttctacacgctcgggcctttgaccaccgacatcgcgccgggctacgaccacatcacctcc
ggcatcggggccgcgatgatcggctggttcggctgcgccatgctgtgctacgtgacgccg
aaggagcatctgggtctccccaaccgcgacgacgtgaaagtcggcgtcatcacctacaag
atcgcggcgcacgcctccgatctcggcaagggccatcccgccgctcaactgcgcgacgac
gcgctgtcccgcgcgcgcttcgacttccgctggcaggaccagttcaacctcggcttggac
cccgaaaccgcggtcgcctatcacgacgagacgctgccgaaggatgcccacaaggtcgcg
catttctgctcgatgtgcgggccgaaattctgctcgatgaagatcacccaggacgtccgc
gactacgcggcgactttgggcgacaacgagaaggcggcgctgaatttgggcggcgcaggc
tcgatgggaatgtcgatctccggcgtgatcgaggacggcatggccaccatgagccagaag
ttcaaggacatgggcgagcaggtctacgtgcaggccgaagccgtgaaggcgagcaacaag
gtgctgtga
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