Tardiphaga sp. vice154: FIU28_09860
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Entry
FIU28_09860 CDS
T11090
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv00061
Fatty acid biosynthesis
tarv00071
Fatty acid degradation
tarv01100
Metabolic pathways
tarv01212
Fatty acid metabolism
tarv02024
Quorum sensing
tarv04146
Peroxisome
Module
tarv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FIU28_09860
00071 Fatty acid degradation
FIU28_09860
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FIU28_09860
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU28_09860
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tarv01004
]
FIU28_09860
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tarv04147
]
FIU28_09860
Enzymes [BR:
tarv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FIU28_09860
Lipid biosynthesis proteins [BR:
tarv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FIU28_09860
Exosome [BR:
tarv04147
]
Exosomal proteins
Exosomal proteins of breast milk
FIU28_09860
Exosomal proteins of breast cancer cells
FIU28_09860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
QDM21401
LinkDB
All DBs
Position
2108678..2110219
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AA seq
513 aa
AA seq
DB search
MTSNLFKGVMSGERRRGFDAINERAARIAGGLHRQGVKPGDSVCILMRNDIAFLEAAYAV
MQLGAYAVPVNWHFKPEEISYVIKDSGTNILIGHADMLHQLREAIPEGIITLSVALPAEI
LANYKIDPAHTGTPDGAIDLETWLQEQAPYDGPKQPQPHNMIYTSGTTGHPKGVRRFAPT
PEQAASTDAMRARVYGLKPGSRALLPGPLYHSAPNAFGLRAGRLGGAQVLMPRFEPEEFL
RIIDEQQIDTVFMVPTMFIRLMKLPHHTRGKYDMSSLRHVIHAAAPCPADVKRAMIDWWG
PVIHEFYGSTESGAVTFATSEDSLKKPGTVGRIADGAELRFLDDDGHILPQGEIGEIYSR
ISGNPDFTYHNKPDKRGEIERDGFITSGDVGYIDEDGYVFICDRKRDMVISGGVNIYPAE
IESALHAVAGVHDCAVFGVPDEEFGEALMAVIEPQPGVVLDLALVRAELKKALADYKVPR
LIVIQANLPREDSGKIFKRRLRDPYWAKAGRAI
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaatctcttcaaaggcgtcatgtcaggcgagcggcggcgcgggttcgatgcg
atcaacgagcgcgctgcgcgcatcgccggcggtctgcaccggcagggcgtcaagcccggc
gacagcgtctgcatattgatgcgcaacgacatcgcgtttctcgaagccgcctatgcggtg
atgcagctcggcgcctatgcggtgccggtgaactggcacttcaagccggaggagatcagt
tacgtcatcaaggactccggcacgaacatcctgatcggccatgccgacatgctgcaccag
ctgcgcgaggcgatccccgagggcatcatcacactcagcgtcgcgctgccggctgaaatt
ctcgcgaactacaagatcgatccggcgcacaccggcacgcccgacggcgcgatcgatctg
gaaacgtggctgcaagagcaggcgccgtatgacgggccgaagcagccgcagccgcacaac
atgatctacacgtcgggcaccaccggccaccccaagggtgtccgacgtttcgcgccgacg
ccggagcaggcggcatcgaccgacgcgatgcgcgcccgcgtctatggcctcaagcctggt
tcgcgcgcgctgctgccggggccgctgtatcactccgcgccaaatgcgttcgggctgcgc
gccggccggctcggcggcgcgcaggtcttgatgccgcgcttcgagccggaggaatttctg
cgcatcatcgacgagcagcagatcgacacggtgttcatggtgccgaccatgttcatccgg
ctgatgaagctgccgcatcacacccgcggcaaatacgacatgtcgtcgctgcgccatgtc
atccatgccgcagccccgtgcccggccgacgtcaagcgcgcgatgatcgactggtggggc
ccggtgatccacgaattctacggctcgacggaatccggcgcggtgaccttcgccacctcc
gaggattcgctgaaaaagcccggcacggtcggccgcatcgctgatggcgccgaactgcgc
ttcctcgacgatgacggccatatactgccgcagggcgagatcggcgagatctattcgcgg
atatccggcaatccggatttcacctatcacaacaagcccgacaagcgcggcgagatcgag
cgcgacggcttcatcacctcgggcgacgtcggctatatcgacgaagacggctacgtcttc
atctgcgaccgcaagcgcgacatggtgatctccggcggcgtcaacatctaccccgccgaa
atcgaatccgcgctgcacgccgtcgccggcgtgcatgattgcgcggtgttcggcgtgccc
gacgaggaattcggcgaggcgctgatggcggtgatcgagccgcagcccggcgtggtgctg
gatctggctttggtccgcgccgagctgaaaaaggcgctggcggactacaaggtgccgcgg
ctgatcgtgatccaggcaaatttgccgcgcgaagattccggcaagatattcaagcgccgt
ctgcgcgatccgtattgggcgaaggcgggacgggcgatctga
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