Tardiphaga sp. vice154: FIU28_10480
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Entry
FIU28_10480 CDS
T11090
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU28_10480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tarv03400
]
FIU28_10480
Enzymes [BR:
tarv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FIU28_10480
DNA repair and recombination proteins [BR:
tarv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIU28_10480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QDM21513
LinkDB
All DBs
Position
complement(2257095..2258537)
Genome browser
AA seq
480 aa
AA seq
DB search
MHFITLDSETDFNGWRKAARTLALNNIKPEDVTWSAPTDEPELFAAPRETPPLETPAGTF
NVSASFVDLARTVILHSAPERFALLYRVLWRLRSNHELLQVATDPDIAKLHALSKAVRRD
KHKMTAFVRFREIGREPKSRFVAWFEPEHHIVEATTPFFTRRFADMAWSILTPDVCAHWD
GHAVSITPGVPKSDAPSEDRLEETWLTYYASIFNPARLKTKAMQSEMPKKYWKNLPEAAL
IRPLIEQAEKLSGAMIASPPTEPKRLQHREAPMPKRVHADTESIAALRDEASHCRMCELW
KDATQTVFGEGPQKASVMMVGEQPGDKEDLAGHPFVGPAGQMLDRALAEAGVDRGKVYMT
NAVKHFKFVPRGKFRLHQKPGIAEIKACRPWYEREKASVQPELVVAMGATAAHSVLGKAT
PIAKTRGRILELDDKTRVLVTVHPSYLLRLPDEEARAREYAHFVEDLRIVAKHLSEAKAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcatcaccctcgacagcgaaaccgacttcaacggctggcgcaaggccgcgcgg
accctggcgctcaacaatatcaagccggaagacgtcacctggtcggcgccgacagacgag
cccgaactgttcgccgcgccgcgcgaaacgccgccgctggaaacgccggccggcaccttc
aacgtctccgcgagtttcgtcgatctcgccagaaccgtgatcctgcacagcgcccccgaa
cgcttcgctttgctctaccgcgtgctgtggcggctgcgctcgaaccacgagctgttgcag
gtcgcgaccgatcccgacatcgcgaagctccacgcgctgtcaaaggcggtacgccgcgac
aagcacaagatgacggccttcgtgcgctttcgcgagatcggccgcgaaccgaagtcgcgc
ttcgtcgcctggttcgagcccgagcatcacatcgtcgaagccaccacgccgtttttcacg
cgccgcttcgccgacatggcgtggtcgattctcacgccggacgtctgcgcgcattgggat
ggccatgccgtctcgatcacgccgggcgtgccgaaatccgacgcgccaagcgaggaccgg
ctggaagagacctggctgacctattacgcctcgatcttcaatccggcgcggctgaagacc
aaggccatgcagtcggagatgccgaagaaatactggaagaacctgccggaggccgccttg
atccggccgctgatcgagcaggccgagaaactcagcggcgcgatgatcgcaagcccgccc
accgaaccgaaacgcctgcagcaccgggaggcgccgatgccgaaacgggttcacgccgac
accgaaagcatcgcggcgctgcgcgacgaggccagccattgccggatgtgcgagttgtgg
aaggacgcgacgcagaccgtgttcggcgaaggcccgcaaaaggcctcggtgatgatggtc
ggcgagcagcccggcgacaaggaggatctggccggacaccccttcgtcggtccggccggg
cagatgctcgaccgcgcgctggcggaagccggcgtcgaccgcggcaaggtctacatgacg
aacgcggtgaagcacttcaagttcgtgccgcgcggcaagtttcgcctgcaccagaagccg
ggcatcgccgagatcaaggcgtgccgcccgtggtacgagcgcgagaaggcctcggtgcag
cccgagctggtggtggcgatgggcgccacggccgcgcatagcgtgctgggcaaggccacg
ccgatcgccaagacccgcggccgcatcctcgaactcgatgacaagacccgcgtgctggtg
acggtgcacccgtcctacctgctgcgattgccggacgaagaagcccgcgcacgggagtat
gcgcacttcgtcgaggatctgcggattgtggcgaaacacctgagcgaagcgaaagcggcg
taa
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