Tardiphaga sp. vice154: FIU28_11910
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Entry
FIU28_11910 CDS
T11090
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tarv Tardiphaga sp. vice154
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tarv03400
]
FIU28_11910
Enzymes [BR:
tarv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FIU28_11910
DNA repair and recombination proteins [BR:
tarv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FIU28_11910
Prokaryotic type
FIU28_11910
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
QDM21775
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Position
complement(2558607..2560064)
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AA seq
485 aa
AA seq
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MTDSSPHIVWFRDDLRLSDHPALHAASMSGAPVICLYVLDEVSTALAPTARPIGGATRWW
LAQSLRTLEASLKRIGGTLVLRRGAAADMIAAVAREAGAGHVHWNEIAQTPHLAVADEVV
EALADLNVGAHSYAGDLLVTPKAIRTKEGRGLRVFTPFWKRILAMGDPAKPLPAPTKLKP
APGVASDKLSDWKLEPTTPDWASGLRGMWTPGEAAAHKRLDLLLKGAVAGYATDRDRPDR
EATSRLSPHLRFGEISPRQVWYAARFSAAEQPKHAADINKFLSEVGWREFCRHLLFDVPD
LATRNLQSSFDAFPWRRDDRSLLAWQRGQTGYPIIDAGMRELWHTGTMHNRVRMVVASFL
VKHLLIDWREGERWFWDTLVDADAGSNPANWQWVAGSGADAAPYFRVFNPILQGEKFDPD
GVYVRRWVPELKDMPSKFIHQPWNASPLEFARAGVTLGETYPMPIVEHKIGRERALKAYA
TTRNS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattcctccccccatatcgtctggtttcgcgacgaccttcgcctgtccgatcat
cctgcccttcatgctgcgtcgatgagcggcgcgccggtgatctgtctctatgtgctcgac
gaggtcagcacggcactcgcgccgaccgcccggccgatcggcggcgccacgcgctggtgg
ctggcgcaatcgctccgtacgcttgaggccagcctgaaacgcatcggcggcacgctggtg
ctgcgccgcggcgcagcggccgacatgatcgcggccgtcgcgcgcgaagccggtgccggt
catgtgcactggaacgagattgcgcagacccctcacctcgcggtcgccgacgaagtggtc
gaagcactggccgacctcaatgtcggcgcccacagctacgcaggcgacttgctggtgacg
ccgaaagcgatccgtaccaaggagggccgcggcctgcgggtgttcacgccattctggaag
cgcattctggcgatgggcgatccggcaaagccgctgccggcaccaacgaaactgaagccg
gcgcccggcgtcgccagcgacaaactgtccgactggaagctcgagccgacaacgccggac
tgggcttccggcttgcgcgggatgtggacgcccggcgaagcggccgcgcacaagcggctc
gatctgttgctgaagggcgcggtcgccggctacgcgaccgaccgcgaccggcccgatcgc
gaagccacgtcgcgcctgtcgccgcacctccggttcggcgagatcagtccgcgtcaggtc
tggtacgcggcgcgcttttccgctgccgagcaaccgaaacatgccgccgacatcaacaaa
ttcctcagcgaggtcggctggcgggagttctgccggcacctgttgttcgacgtcccggac
ctcgccacgcgcaatctgcagagctcgttcgatgcctttccctggcggcgcgacgaccgt
tcgctactggcctggcagcgcggacagaccggctacccgatcatcgacgccggcatgcgc
gagctctggcacaccggcaccatgcacaatcgcgtccgcatggtggtcgcttccttcctc
gtcaaacacctcctgatcgactggcgcgaaggcgaacgatggttctgggatacactcgtc
gatgccgacgccggcagcaatccggccaactggcaatgggtggcaggctccggtgcggat
gccgcgccctacttccgcgtcttcaatccgatccttcagggagaaaaatttgaccccgat
ggagtctacgtccgacgctgggtgccggagctgaaagacatgccgtcgaagttcatccac
caaccctggaatgctagcccgctagagtttgcgcgcgcgggcgtcacgctcggcgagacc
tatccgatgccgatcgtcgaacacaaaattggtcgcgagcgtgcattgaaagcgtatgcg
acgacacgaaacagttga
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