Tardiphaga sp. vice154: FIU28_12105
Help
Entry
FIU28_12105 CDS
T11090
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
tarv Tardiphaga sp. vice154
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tarv03000
]
FIU28_12105
Transcription factors [BR:
tarv03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FIU28_12105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
MarR_2
HTH_8
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QDM21806
LinkDB
All DBs
Position
complement(2599173..2600045)
Genome browser
AA seq
290 aa
AA seq
DB search
MKNLNFNHLRYFWAVAHEGSLTRAAERLNLSQSALSVQIQKLEHQIAHPLFERVGKRLVL
TEAGQIALDYADTIFQAGDELMSTLDGRPLANRQVLRVGALTTLSRNFQLEFLHPLVGRT
DVELIVRSGTIRDLLAQLEAHAIDVVLSNSAAPRDARAPFRNHLLNEQPVSLVGRPRPGK
APFRFPEDLRSEPILLPSLDSDIRIAFDRLLELAGIRPIILAEVDDMAMLRLLAREREGV
TLVPPIVVRDELESGALVEHCRIPHLSESFYAIILNRRFPNQLLAELLAR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctgaatttcaaccaccttcggtatttctgggcggtcgcgcatgaaggcagc
ctcacgcgcgccgccgaacggctgaacctgtcgcaatctgcgctatcggtgcagatccag
aaacttgaacatcagatcgctcatccattgttcgagcgcgtgggcaaacgcctcgttctg
accgaggccggccagatcgcgctcgactatgccgacactatcttccaggcaggcgacgag
ttgatgagcaccctcgacggacgcccactggcaaaccgccaggtcttgcgggtcggcgcg
ctgacgaccctgtcgcgcaatttccagctcgaattcctgcaccccttggtcggccgtacc
gacgtggaattgatcgtgcgttccggaaccatacgcgaccttctggcgcagcttgaagcg
cacgcgatcgatgtggtgctgtccaacagcgccgctcctagggacgcacgcgcgccgttt
cgcaaccatctcctcaacgaacagcccgtcagcctggtcgggcggccgagacctggcaaa
gcgccgtttcgctttccagaagatttgcgcagcgagccgatcctgcttcccagcctcgac
agcgacatccggatcgccttcgatcgacttcttgaactggcgggcatacgccccatcatc
ctggccgaagtcgacgatatggcgatgcttcgcttgttggcccgtgagcgcgaaggcgtg
accctggtgccaccgattgtggtgcgggatgaactcgaatccggcgctctcgtcgagcac
tgtcgtattccccatctctccgagagcttttatgccatcatcctgaaccgacggttcccc
aaccagcttctggccgaactactggcgagatag
DBGET
integrated database retrieval system
