Tardiphaga sp. vice154: FIU28_12945
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Entry
FIU28_12945 CDS
T11090
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv00260
Glycine, serine and threonine metabolism
tarv00460
Cyanoamino acid metabolism
tarv00630
Glyoxylate and dicarboxylate metabolism
tarv00670
One carbon pool by folate
tarv00680
Methane metabolism
tarv01100
Metabolic pathways
tarv01110
Biosynthesis of secondary metabolites
tarv01120
Microbial metabolism in diverse environments
tarv01200
Carbon metabolism
tarv01230
Biosynthesis of amino acids
tarv01240
Biosynthesis of cofactors
tarv04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FIU28_12945
09102 Energy metabolism
00680 Methane metabolism
FIU28_12945
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FIU28_12945
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FIU28_12945
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FIU28_12945
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FIU28_12945
Enzymes [BR:
tarv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FIU28_12945
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Poly_A_pol_cat
Motif
Other DBs
NCBI-ProteinID:
QDM21957
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Position
2768417..2769718
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AA seq
433 aa
AA seq
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MTSSAHSASAPDSFFTATIADTDPEIAAAIKGELGRQRHEIELIASENIVSRAVMEAQGS
VMTNKYAEGYPGARYYGGCEFVDIAENLAIERAKKLFGAGFANVQPNSGSQMNQAVFLAL
LQPGDTFMGLDLAAGGHLTHGSPVNMSGKWFKPAHYTVRQDDQLLDMDAIARQAEEVKPK
LIIAGGSAYSRSWDFKRFREIADSVGAYLLVDMAHFAGLVAGGVHASPVPYAHVTTTTTH
KSLRGPRGGLILTNDEALAKKFNSAIFPGLQGGPLMHVIAAKAVAFKEALQPDFKVYAKN
VVENARALAETLRAQGYDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAGITCNKNGVP
YDPEKPWVTSGIRLGTPAATTRGFGIAEFKQTGEMIAEVLSAVAQSGDGTAPLVEAAVKE
RVKALTDRFPIYQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcttcggcccacagcgcttccgcgcccgactcgttcttcaccgccaccatcgcc
gacaccgatccggagatcgccgcggcgatcaagggcgagcttggccgccagcgccacgag
atcgagctgatcgcctcggagaacatcgtcagccgcgccgtgatggaagcgcagggctcg
gtgatgaccaacaaatatgccgagggttatccgggcgcgcgctattatggcggctgcgag
ttcgtcgatatcgccgagaacctggcgatcgagcgcgccaagaagctgttcggcgccggc
tttgccaatgtgcagccaaactccggcagccagatgaaccaggcggtgttcctggcgctg
ttgcagcccggcgacaccttcatgggcctcgacctcgccgccggcggccatctgacgcac
ggctcgccggtcaacatgtccggcaagtggttcaagccggcgcactacaccgtgcggcag
gacgaccagctgctcgacatggatgccatcgccaggcaggccgaggaggtcaagccgaag
ctgatcattgccggcggctcggcctattcgcgtagctgggacttcaagcgcttccgcgag
atcgccgacagcgtcggcgcctacctgctggtcgacatggctcatttcgccggcctcgtc
gccggcggcgtgcatgcctcgccggtgccttacgcccacgtcaccaccaccaccacgcac
aagtcgctgcgcggcccgcgcggcgggttgattctcaccaatgacgaggcgctggccaag
aagttcaattcggcgatcttcccgggcctgcagggcgggcccttgatgcatgtcatcgcc
gccaaggccgtggccttcaaggaggcgctgcagccggacttcaaggtctacgccaagaac
gtcgtcgagaatgcccgcgcgctggccgaaacgctgcgcgcgcagggctacgacatcgtc
tccggcggcaccgacaaccatctgatgctggtcgacctgcgacccaagggcctgaaaggc
aacgtgtcggagaaggcgctggttcgcgccggcatcacctgtaacaagaacggcgtgccc
tatgaccccgagaagccgtgggtcacgtcgggcatccgtctcggcacgccggcggccacc
acgcgcggcttcggcatcgccgagttcaagcagaccggcgagatgatcgccgaagtgctg
agcgcggtggcgcagtccggcgacggcaccgcgccgctggtcgaggccgccgtcaaggaa
cgcgtcaaggcacttaccgaccgtttcccgatctatcagtaa
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