Tardiphaga sp. vice154: FIU28_14185
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Entry
FIU28_14185 CDS
T11090
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tarv Tardiphaga sp. vice154
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tarv03009
]
FIU28_14185 (rimO)
Enzymes [BR:
tarv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FIU28_14185 (rimO)
Ribosome biogenesis [BR:
tarv03009
]
Prokaryotic type
ribosomal protein modification factors
FIU28_14185 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
NTPase_1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QDM22176
LinkDB
All DBs
Position
complement(3043839..3045167)
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AA seq
442 aa
AA seq
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MQQAAAPKISFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKA
ESLGAIGEAMAQNGKVIVTGCMGAEPEQIEAAYPNVLSITGPQQYESVLDAVHRALPPVY
NPHLDLMPPQGIKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPANEVLREAENLV
KAGVKELLVVSQDTSAYGVDTKYATSIWKDREVRAKFYDLAKELGELGAWVRLQYVYPYP
HVDEVIGLMNANKNVLPYLDIPFQHAAPDVLKAMKRPAAQDKTLARIKKWREECPDLTLR
STFIVGFPGETESDFQYLLDWLEEAQIDRVGAFKYESVAGAPSNALGNAVPEEIKQLRWN
ALMERQQKISTRRLKRKVGTRQQVIIDEVGPTVSKGRSKSDAPQIDGAVYVSARRPLKVG
EIVTAKIERADAYDLHGTVAGF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggccgctgcgcccaaaatttcctttgtgtcgctgggatgccccaaagcgctg
gtggattccgaacgcattatcacgcggctgcgcgccgaaggctatgagctggcgcgcaag
catgacggcgccgacatcgtcatcgtcaacacctgcggcttcctcgacagcgccaaggcg
gagtcgctgggcgcgatcggcgaggcgatggcgcagaacggcaaggtgatcgtcaccggc
tgcatgggtgcggagcccgagcagatcgaggccgcctaccccaacgtcctctccatcacc
ggcccgcagcagtacgagagcgtgctcgacgccgtgcaccgcgcgctgccgccggtctac
aatccgcatctcgatttgatgccgccgcagggcatcaagctgacaccgcggcactatgcc
tatctgaagatttccgaaggctgcaacaaccgctgcagcttctgcatcatcccgaagctg
cgcggcgatctcgtctcgcggccggccaacgaggtgctgcgcgaggccgagaacctggtg
aaggccggcgtcaaggaattgctggtggtatcccaggatacatcggcctatggcgtcgat
accaaatatgcgacctcgatctggaaggaccgcgaggtccgcgccaaattctatgatctc
gccaaggagctcggcgagctcggcgcctgggtgcggctgcaatatgtctacccctacccg
catgtcgacgaagtaatcgggttgatgaacgccaacaagaacgtgctgccctatctcgac
attccgttccagcacgccgcccccgacgtgctgaaggcgatgaagcgcccggcagcgcag
gacaagacgctggcgcggatcaagaagtggcgcgaggagtgcccggacctgacgctgcgc
tcgaccttcatcgtcggcttccccggcgagaccgagagcgacttccagtatttgctcgac
tggctggaggaagcacagatcgatcgcgtcggcgcgtttaagtatgagtcggttgctggt
gcgccgtccaatgcgctcggcaacgccgtgccggaagagatcaagcaattgcgctggaac
gcgctgatggagcgccagcagaagatctccacccgccgcctgaagcgcaaggtcggcacc
cggcagcaggtgatcatcgacgaggtcggcccgacagtatcgaagggccgctcgaaatcc
gacgcgccgcagatcgacggtgcggtctacgtctcggcccgccggccgctgaaggtcggc
gagatcgttaccgcgaagatcgagcgcgcggacgcctatgatctgcacggaaccgtggcg
gggttctga
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