Tardiphaga sp. vice154: FIU28_14880
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Entry
FIU28_14880 CDS
T11090
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
tarv Tardiphaga sp. vice154
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tarv01002
]
FIU28_14880
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tarv01011
]
FIU28_14880
Peptidases and inhibitors [BR:
tarv01002
]
Cysteine peptidases
Family C82
FIU28_14880
Peptidoglycan biosynthesis and degradation proteins [BR:
tarv01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FIU28_14880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QDM24490
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Position
complement(3201331..3202833)
Genome browser
AA seq
500 aa
AA seq
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MSALLAPGGIEAAPGQVTSGGPLAPLAASAPAEQPSAPSAAPATKAATVPSAKPAATSKP
AAVKPSGTTAAIQAVVNAPVQPAVAPLEQPPAAPSAAAPATTPAKPADKAASNAPVATPE
SRSAALLAQSSEPTFDAGSAQRIGEAIDAYSTIAKLGGWPQIPAEAKFALGSAGAHDEML
RLRLVMTGDLAPSEAKGPYNAGLAAGVKRFQARHGLATTGTIGPRTLTALNVPVEKRIQQ
LEASLQRIAAIGFRFGQRYVVVNLPAAFAEAVENDKVVRRYRVILGKADKPSPTVTAEIN
NVNLNPTWTVPASITKNEIAAHMRKDPTYLSRLHMQVLDFKENVLDPASIDWAAEKLPNI
FVRQEPGSWNALGQLKIDMPNAYAVYMHDTNQKNLFSEDVRFESHGCVRVDNVRDLAAWL
LQETPNWERPQIDAAIATGVKQSVKLEKKVPVAWIYLTAWMTRDQIVQFRGDVYDQDAQL
VEATAEEKAFFDQAAKSRTN
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccttgctggccccgggcggcatcgaggccgcacccggccaggttacctcgggc
ggccccttggcgccgctggccgccagcgcacctgccgaacagccgtcggctccgagcgcc
gcgcctgctaccaaggctgcgacggtgccgtctgccaagcctgcagcaacttccaaaccc
gccgcagtgaagccgtctggtactacggcggccatccaggccgtggtgaacgcgccggtt
cagcccgcggtcgcgccgctcgaacaaccgcccgcggcgccctcggctgcggcccccgca
acaacaccggccaagcctgccgacaaggcggcatcgaacgccccggtcgccacgccggaa
agccgctcggcggccttgctcgcgcaatcctccgagcccaccttcgatgccggatccgcg
cagcggatcggcgaggcgatcgacgcctattccacgatcgccaaactcggcggctggccg
cagattccggccgaggcgaaattcgcgctgggcagcgccggcgcgcatgacgagatgctg
cggctgcgtctggtgatgaccggcgatctggcgccgtcggaagccaagggaccctacaac
gccggactggctgccggcgtgaagcgtttccaggcgcgacacggcctcgccaccaccggg
acgatcggcccgcggacgctgaccgcgctcaacgtgccggtcgagaagcggatccagcag
ctcgaggcctcgttgcaacgcatcgccgcgatcggcttccgcttcggccagcgctacgtc
gtcgtcaatctgcccgcggcctttgccgaggcggtcgagaatgacaaggtggtgcgacgc
taccgcgtcatcctcggcaaggccgacaagccgtcgccgacggtcaccgccgagatcaac
aacgtcaatttgaacccgacctggaccgtgccggcctcgatcaccaagaacgagatcgcc
gcgcatatgcgcaaggatccgacctatctcagccggttgcacatgcaggtgctggacttc
aaggagaacgtgctcgatcccgccagcatcgactgggcggcggagaagctgccgaacatc
ttcgtgcgccaggagcccggctcctggaacgcgctcgggcagttgaagatcgacatgccg
aacgcctatgcggtctacatgcacgataccaaccagaagaatttgttcagcgaggacgtc
cggttcgaatcgcacggctgcgtgcgcgtcgacaatgtccgcgatctcgcggcctggctg
ctgcaggagacgccgaactgggagcgcccgcagatcgacgcggcgatcgccacgggcgtg
aagcagagcgtcaagctagaaaagaaggttccggtcgcctggatctatctcaccgcttgg
atgacgcgcgaccagatcgtgcaattccgcggtgacgtctacgaccaggatgcccagctc
gtcgaagcgacggcggaagagaaggcgttcttcgaccaggcggcaaagagccggacgaac
tga
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