Tardiphaga sp. vice154: FIU28_15010
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Entry
FIU28_15010 CDS
T11090
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU28_15010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tarv02000
]
FIU28_15010
Transporters [BR:
tarv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FIU28_15010
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QDM24495
LinkDB
All DBs
Position
3218521..3220233
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AA seq
570 aa
AA seq
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MHGEPALPANFTAMPYVNPAAPKGGRLVYGVHGTFDSLNPFIVRGLAVPQMRGFVVESLM
TRGQNEAFTLYGLLAQSVETDDARSFVTFRLDPRATFSDGRPLTADDVVFSWALLRDKGR
PNHRQYYAKVAKAEVLDARTVRFDFGGQGDRELPLILGLMPVLPRHAINAETFEETSMAP
PLGSGPYRVSAVKPGATVTLTRNPDYWGRDLPVNRGLWNFDEIRLDYFREANGHFEAFKR
GLYDFRVEYEPLRWHDGYNFAAVKSGEVIRDAITTGLPKPSEFLVFNTRRPIFADIRVRQ
AMTLLFDFEWINRSYFFGLYARSAGFFPGSELSAYARPADARERALLEPYAAQMPADILD
GLYRLPVSDGSGRDRETLRRALELLAETGFDLDDNVLRKRDSRAPFAFEILVTSRDQERI
ALAYARDLKRAGIAMNVRAIDAVQFDQRKLSYDFDMIQNRWDQSLSPGNEQSFYWGSEAA
SLPGTRNYMGAKDPAIDALIATMLVTRDRAPFVDAVRALDRVLIAGFYAIPLYHVREQWI
ARWNRIERPQASALTGYLPESWWTQIPDRK
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgaaccggctctgcccgcaaacttcaccgcgatgccctacgtcaatcccgca
gcccccaagggcggccggctggtctacggcgtgcacggcaccttcgacagcctcaacccc
ttcatcgtccgcggcctcgccgtgccgcagatgcgcggcttcgtggtcgagagtctgatg
acgcgcggccagaacgaggcctttacgctgtacggcctgctcgcgcagagcgtcgagacc
gacgacgcgagaagcttcgtcaccttccgactcgacccgcgcgccaccttctcggacggc
cggccgctgacggccgacgacgtcgtcttctcctgggccttgctgcgtgacaagggccgg
cccaaccaccggcaatattatgccaaggtcgcgaaggccgaggtgctggatgcgcgcacc
gtgcgcttcgacttcggcggccagggggaccgcgagctgccgctgatcctcggcctgatg
ccggtgctgcccaggcacgccatcaacgccgagacgttcgaggaaacctcgatggccccg
cctctggggtcagggccctaccgcgtcagcgcggtgaaaccgggagcgacggtgacgctg
acgcgcaacccggactattgggggcgcgacctgccggtcaatcggggcttatggaatttc
gacgagatccggctcgattattttcgcgaggccaatgggcatttcgaggcgttcaagcgc
gggctctatgactttcgcgtcgagtacgaaccgttgcgctggcacgacggttacaacttc
gccgccgtgaaatccggcgaggtgatccgcgatgccatcaccaccggcctgccgaagcca
tccgaattcctggtgttcaacacccggcgcccgatctttgccgacatccgcgtgcggcag
gcgatgacgcttttgttcgatttcgaatggatcaaccgcagctatttcttcggcctctat
gcccgctccgccggcttcttcccgggctctgaactctccgcctatgcgcgcccggccgac
gcgcgcgagcgcgctctgctggagccctatgcggcgcagatgccggccgacattctcgac
ggcctctatcgcctgcccgtctcggatggctccggtcgcgaccgcgaaacgttgcgccgc
gcgctcgagctgctggcggagaccggcttcgacctcgacgacaacgtgctgcgcaagcgc
gacagccgggcgccgttcgccttcgagatcctggtcaccagccgcgaccaggagcgcatc
gcgctggcctatgcccgcgacctcaagcgggccggcatcgcgatgaacgtgcgcgcgatc
gacgccgtgcagttcgaccagcgcaagctttcctacgacttcgacatgatccagaaccgc
tgggaccagtcgctgtcgcccggcaacgagcaatccttctactggggcagcgaggcggcc
tccctgcccggcacccgcaactacatgggcgcgaaggacccggcgatcgacgccctgatc
gcgaccatgctggtgacgcgcgaccgcgcgccgttcgtcgatgcggtgcgcgcgctcgac
cgcgtgttgatcgccggattctacgccataccgctgtaccacgttcgcgaacaatggatt
gcgcgatggaatcggatagaacggccacaggcatcggcgctaacgggttatctcccggag
agctggtggacccaaattccggatcggaagtaa
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