Tardiphaga sp. vice154: FIU28_15775
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Entry
FIU28_15775 CDS
T11090
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tarv Tardiphaga sp. vice154
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tarv03032
]
FIU28_15775 (topA)
03400 DNA repair and recombination proteins [BR:
tarv03400
]
FIU28_15775 (topA)
Enzymes [BR:
tarv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FIU28_15775 (topA)
DNA replication proteins [BR:
tarv03032
]
Prokaryotic type
DNA Topoisomerases
FIU28_15775 (topA)
DNA repair and recombination proteins [BR:
tarv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FIU28_15775 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QDM22449
LinkDB
All DBs
Position
3380521..3383316
Genome browser
AA seq
931 aa
AA seq
DB search
MNIVIVESPSKAKTINKYLGPDYEVLASFGHVRDLPAKNGSVDPDANFQMIWEVDPKAAG
RLNDIAKALKGADKLILATDPDREGEAISWHVLEVLKEKRAIKDHKIERVVFNAITKQAV
TEAMKNPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVPREYWSLVTTLATPRGESFEARLIGADGKKIQRLDIGTGEEAEDFRKAIDAA
KFEVTTVEAKPARRNPQAPFTTSTLQQEASRKLGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDGSAIIQAREVIGEDYGKKYVPDVARQYSTKAKNAQEAHEAIRPTDLSR
RPASLRGRLDNDQSRLYELIWVRTIASQMESAEMERTTVDISAKAGARVLELRATGQVVK
FDGFLAVYQEGKDDDTDDEDSRRLPAMSEGETLKKENLAVTQHFTEPPPRFSEASLVKRM
EELSIGRPSTYASILQVLKDRGYVRLEKKRLYGEDKGRVVVAFLENFFARYVEYDFTAAL
EENLDRISNNEISWQEVLRDFWTDFIGAVNEIKDLRVTQVLDALDDMLGPHIYAPREDGG
DPRQCPTCGTGKLNLKAGKFGAFVGCSNYPECRYTRPLAADSGATADRILGKDPLTDRDV
AVKAGRFGPYIQLGDVKDYAEGEKPKRAGIPKDTSPSDVELDLALKLLSLPREVGKHPET
GEPITAGLGRFGPFVRHEKTYASLEAGDEVFDIGLNRAVTLIAEKILKGPSGRKFGADPG
KPLGEHPTLGGVAVKGGRYGAYVTAGGVNATIPSDKTQETITLEEAIALIDERAAKGGGK
KPKRAAKKAVAKKAPAKKAAAKSDDADAKPAKKAAPKKKATAKKAVAKKAAAKPKAESAA
ASPARAPVTAKTSPAKKVAKPAAKKSASKNG
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtcgagtcgccctccaaagccaagacgatcaacaagtatctcggg
cctgactacgaggtgctggcgtcgttcggccatgtgcgcgaccttcctgccaagaacgga
tcggtcgatccggatgccaatttccagatgatctgggaggtcgatcccaaggctgccggc
cgccttaatgacatcgccaaggcgctcaagggcgccgacaaactgatcctcgcgaccgac
ccggaccgcgaaggcgaggcaatctcctggcacgtgctcgaagtgctgaaagagaagcgt
gcgatcaaggaccacaagatcgagcgcgtcgtgttcaacgccatcaccaagcaggcggtg
acggaagcgatgaagaacccgcgccagatcgatggcgcgctggtcgacgcctacatggcg
cgccgcgcgctggactatctggtcggcttcacgctgtctccggtgctgtggcggaaactg
cccggcgcacgctccgccggccgcgtgcagtcggtcgcgctgcggctggtatgcgaccgc
gaactcgaaatcgaaaagttcgtgccccgcgaatactggtcgctggtcaccacgctggcg
acgccgcgcggcgagagctttgaagcgcgcctgatcggcgccgacggcaagaagatccag
cggctcgacatcggcaccggcgaggaagccgaggatttccgcaaggcgatcgacgccgcc
aaattcgaagtgaccaccgtcgaagccaagcccgcacgccgcaatccgcaggcgccgttc
acgacctcgacgctgcagcaggaagccagccgcaagctcggcttcgcgccggcgcacacc
atgcggatcgcgcagcggctctatgaaggcatcgacatcggcggcgagaccaccggtctc
atcacctatatgcgaaccgacggcgtgcagatcgacggctcggcgatcatccaggcccgc
gaagtgatcggcgaagactacggtaagaaatacgttcccgacgtcgcgcggcaatactcg
accaaggccaagaacgcccaggaggcgcatgaagcgatccgcccgacagatctgtcgcgc
cgccccgcctcgttgcgcggccgtctcgataacgaccagtcgcggctctatgagctgatc
tgggtccgcaccatcgccagccagatggaatccgccgagatggagcgcaccacggtggac
atctccgccaaggccggcgcccgcgtgctggaattgcgcgccaccggccaggtggtgaag
ttcgacggctttctcgcggtctaccaggaaggtaaggacgacgacaccgacgacgaggat
tcgcgccgcctgcccgccatgagcgaaggcgagacgctgaagaaagagaatctcgccgta
acccagcacttcaccgaaccgccaccgcgcttctcggaagcgtccctggtgaagcggatg
gaagagctttcgatcggccggccctcgacctatgcgtcgatcctgcaggtactgaaggac
cgcggctacgtccggctcgagaagaagcgcctctacggcgaggacaagggccgcgtcgtc
gtcgccttcctggagaacttcttcgcgcgctacgtggagtacgacttcacggcggcgctg
gaagagaacctcgaccgcatctccaacaacgagatctcctggcaagaggtgctgcgcgac
ttctggaccgacttcatcggcgcggtcaacgagatcaaggacctgcgcgtcacccaggtg
ctggacgcgctcgacgacatgctcgggccgcacatctatgcgccgcgcgaagacggcggc
gatccgcgccagtgcccgacctgcggcaccggcaaattgaatctcaaggccggcaagttc
ggcgccttcgtcggctgctcgaattacccggagtgccgctacacccgcccgctcgcggcg
gattccggcgcgacggccgaccgtattctcggcaaggacccgctgaccgatcgcgacgtc
gccgtgaaggccggccggttcggaccctatatccagctcggcgacgtcaaggactacgcc
gagggcgagaagccgaagcgcgccgggattccgaaggatacgtcgccaagcgatgtcgaa
ctcgatctcgcgctgaaactgctgtcactgccgcgtgaagtcggcaagcacccggagacc
ggcgagccgatcaccgcaggcctcggccgcttcgggccgttcgtgcgccatgaaaaaacc
tatgccagcctggaagccggcgacgaagtgttcgacatcgggctcaaccgcgccgtgacg
ctgattgccgagaagatcctgaagggtccgagcggtcgcaagttcggcgccgatcccggc
aagccgctcggcgagcatccgacgctcggcggcgtggccgtcaagggcgggcgctacggc
gcctatgtcaccgccggcggcgtcaacgcgacgatccccagcgacaagacgcaggagacc
atcacgctggaagaagccatcgcgctgatcgacgagcgcgccgccaagggcggcggcaag
aagccgaagcgcgccgccaagaaggccgtcgccaagaaagcaccggccaagaaggccgcg
gcaaagtctgacgacgcggatgccaagcctgccaagaaggcggcaccgaagaagaaggcc
acggccaagaaggccgttgccaagaaagcggctgccaagccgaaggccgaaagcgcggcc
gccagtccggcgcgcgcgccggtgacggcgaaaacctcgccggccaagaaggtcgcaaaa
cctgctgcgaagaaaagcgccagcaagaacggataa
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