Tardiphaga sp. vice154: FIU28_18825
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Entry
FIU28_18825 CDS
T11090
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv00061
Fatty acid biosynthesis
tarv00071
Fatty acid degradation
tarv01100
Metabolic pathways
tarv01212
Fatty acid metabolism
tarv02024
Quorum sensing
tarv04146
Peroxisome
Module
tarv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FIU28_18825
00071 Fatty acid degradation
FIU28_18825
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FIU28_18825
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU28_18825
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tarv01004
]
FIU28_18825
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tarv04147
]
FIU28_18825
Enzymes [BR:
tarv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FIU28_18825
Lipid biosynthesis proteins [BR:
tarv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FIU28_18825
Exosome [BR:
tarv04147
]
Exosomal proteins
Exosomal proteins of breast milk
FIU28_18825
Exosomal proteins of breast cancer cells
FIU28_18825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_9
DUF764
Motif
Other DBs
NCBI-ProteinID:
QDM22980
LinkDB
All DBs
Position
4021698..4023626
Genome browser
AA seq
642 aa
AA seq
DB search
MMDYAGRVAQADTYPKLLRLNAREHGTDIALREKDFGLWRVFTWDDYQARVRDFALGMVE
LGIARGDVVGIIGDNRPDWVSAEIAAHAVGAMSLGLYRDVLDEEAAYLLNYGEARIVFAE
DEEQVDKLLALGDRVPLLRHIVYSDPRGMRKYDDPRLLEADRLAKMGRDRAAREPDLYDR
MVDSTRGEDVAILCTTSGTTSHPKLAMLAAGRVLGHCAVYLAFDPKDSSDEYVSVLPLPW
IMEQVYALGKGLLARMKVNFVEQSDTMMNDFREIAPTFVLFAPRVWEGIAADVRARVMDS
SPLKQQLYEVGMKAGLAALADGKKSAVADLILFRALRDRLGFTRLRSAATGGAALGPDTF
KFFRAMGVPLRTLYGQTETLGAFTLHNAGAVDPDTTGVAMGDSIRIEIREPDVHGVGEIV
VQHPNMFLGYYKAPEASAADLRDGWMHSGDAGYFNDAKQLVVIDRIKDLAQTARGERFSP
QYIENKLKFSPYIAETVVLGDQRDVLAAMICIRFSIISKWAEKNRISFTTYTDLASRPEV
YALIRKEVEIVNATLPPAQRIAKFLLLYKELDADDGELTRTRKVRRSVINEKYADIIDGI
YGGARDIPVDTVIRFQDGTTQRIRTTLLVIDLARDVAMEAAE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgatggattacgccggacgcgtcgcacaggccgacacctatccgaagctgctgcggctg
aacgcccgcgagcatggcaccgacatcgcgcttcgcgaaaaggactttggcctgtggcgc
gtcttcacctgggatgactaccaggcgcgggtaagagattttgcgctcggcatggtcgag
cttggaatcgccagaggcgatgtggtcggcatcatcggcgacaaccggccggactgggtc
agcgcggagatcgccgcgcatgcagtcggcgcgatgagcctcggtctttaccgcgacgtg
ctcgacgaggaagccgcctatctcctgaactacggcgaggcgagaatcgtattcgccgag
gatgaggagcaggtcgataaattgctggcgctcggcgaccgcgtgcccctgctacgccac
atcgtctactccgatccgcgcggcatgcggaaatatgacgatccccgcctgctcgaagcc
gacagactggcaaaaatgggccgcgaccgcgccgcgcgtgagccggacctctacgatcgc
atggtcgattcgacccgcggcgaggacgtcgccatcctctgcaccacgtcgggcaccacc
tcgcatccgaagctggcgatgctcgcggccgggcgcgtgctcggccattgcgcggtctat
ctggctttcgaccccaaggattcctccgacgaatatgtctcggtgctgccgctgccgtgg
atcatggagcaggtctatgcgctcggcaaagggctgctcgcccggatgaaggtcaatttc
gtcgagcaatccgacacgatgatgaacgacttccgcgagatcgcgccgaccttcgtgctg
ttcgcgccgcgcgtctgggagggcatcgccgccgacgtccgtgcccgcgtgatggattcc
tcgccgctgaagcagcagctatacgaggtcggcatgaaggccggcctggcggcactggcc
gacggcaagaaatccgctgtcgccgatctcatcctgttccgcgcgctacgtgatcgcctc
ggcttcacgcggctgcgctcggcagcgaccggcggcgcggcgttggggcccgacaccttc
aagttcttccgcgccatgggcgtgccgctgcgcaccttgtacggccagaccgagacactt
ggcgccttcacgctgcacaacgccggcgccgtcgatcccgacaccaccggcgtcgcaatg
ggcgacagcatccggatcgagatccgcgaacctgacgtgcacggcgtcggcgagatcgtg
gtccagcaccccaacatgttcctcggctattacaaggcgccggaagcctccgccgccgat
ctccgcgacggctggatgcattccggcgatgccggctatttcaacgatgcgaaacagctc
gtggtgatcgaccgcatcaaggacctcgcccagaccgcgcgcggcgaacgcttctcgccg
caatatatcgagaacaagctgaagttttcaccgtacattgccgagacggtcgtgctgggg
gaccagcgcgacgtgctggccgccatgatctgcatccgcttctcgatcatttcgaaatgg
gcggaaaagaaccggatttccttcaccacctacaccgatctcgcctcgcgcccggaagtc
tacgcgctgatccgcaaggaggtcgaaatcgtcaacgcgacgctgccgccggcgcagcgc
atcgccaagttcctgctgctgtacaaggaactcgacgccgacgacggcgagctgacccgc
acccgaaaagtccgccgcagcgtcatcaacgagaaatacgccgatatcatcgacggcatc
tatggcggcgcgcgggatatcccggtcgacaccgtgatccgcttccaggacggcaccacg
caacgcatccggaccacgctgctggtgatcgacctggcgcgggatgtcgcgatggaggcg
gcggaatga
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